C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00077U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055128-ENSDARG00000008366 CGP 7955 12:24376139-24788178
GeneTranscriptPositionBiotype
ENSDARG00000008366 (mpp7)
membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 		ENSDART00000077914 (mpp7-201) 24526979-24788178 protein_coding
ENSDART00000077915 (mpp7-001) 24525225-24603156 protein_coding
ENSDARG00000055128 (armc4)
armadillo repeat containing 4 		ENSDART00000077453 (armc4-201) 24376300-24478009 protein_coding
ENSDART00000152887 (armc4-002) 24476907-24478721 retained_intron
ENSDART00000153115 (armc4-003) 24376139-24417868 nonsense_mediated_decay

Danio rerio Ensembl (Zv9)

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CIL_00077U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169126-ENSG00000150054 CGP 9606 10:27812164-28334486
GeneTranscriptPositionBiotype
ENSG00000150054 (MPP7)
membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 		ENST00000337532 (MPP7-201) 28050993-28280142 protein_coding
ENST00000375719 (MPP7-002) 28054061-28282089 protein_coding
ENST00000375732 (MPP7-001) 28050993-28282138 protein_coding
ENST00000441595 (MPP7-004) 28054143-28334486 protein_coding
ENST00000474682 (MPP7-007) 28236601-28238700 processed_transcript
ENST00000474731 (MPP7-006) 28125010-28203232 processed_transcript
ENST00000481244 (MPP7-005) 28124072-28282106 processed_transcript
ENST00000496637 (MPP7-003) 28051168-28238737 nonsense_mediated_decay
ENSG00000169126 (ARMC4)
armadillo repeat containing 4 		ENST00000305242 (ARMC4-001) 27812168-27999048 protein_coding
ENST00000434029 (ARMC4-002) 27957049-27987449 protein_coding
ENST00000467083 (ARMC4-005) 27812170-27813442 processed_transcript
ENST00000480504 (ARMC4-003) 27944823-27981904 processed_transcript
ENST00000481659 (ARMC4-006) 27812164-27836163 processed_transcript
ENST00000486279 (ARMC4-004) 27994972-27997514 protein_coding
ENSG00000226016 (RPL36AP55)
ribosomal protein L36a pseudogene 55 		ENST00000454114 (RPL36AP55-001) 27904209-27905162 processed_pseudogene
ENSG00000233472 (RP11-218D6.4)
 ENST00000425137 (RP11-218D6.4-001) 27999788-28049615 lincRNA
ENSG00000275036 (MIR8086)
microRNA 8086 		ENST00000621498 (MIR8086-201) 28289258-28289350 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00077U_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061802-ENSMUSG00000057440 CGP 10090 18:7088233-7626863
GeneTranscriptPositionBiotype
ENSMUSG00000057440 (Mpp7)
membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 		ENSMUST00000115869 (Mpp7-201) 7347962-7626863 protein_coding
ENSMUSG00000061802 (Armc4)
armadillo repeat containing 4 		ENSMUST00000081275 (Armc4-201) 7088233-7297901 protein_coding
ENSMUSG00000094334 (Fabp5l2)
fatty acid binding protein 5-like 2 		ENSMUST00000072582 (Fabp5l2-201) 7581516-7581923 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077U_0001ENSDARG00000008366ENSDART00000077914ENSDART00000077915ENSDARG00000055128ENSDART00000077453ENSDART00000152887ENSDART00000153115CIL_00077U_0002ENSG00000150054ENST00000337532ENST00000375719ENST00000375732ENST00000441595ENST00000474682ENST00000474731ENST00000481244ENST00000496637ENSG00000169126ENST00000305242ENST00000434029ENST00000467083ENST00000480504ENST00000481659ENST00000486279ENSG00000226016ENST00000454114ENSG00000233472ENST00000425137ENSG00000275036ENST00000621498CIL_00077U_0003ENSMUSG00000057440ENSMUST00000115869ENSMUSG00000061802ENSMUST00000081275ENSMUSG00000094334ENSMUST00000072582
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077U_0001ENSDARG00000008366ENSDART00000077914ENSDART00000077915ENSDARG00000055128ENSDART00000077453ENSDART00000153115CIL_00077U_0002ENSG00000150054ENST00000337532ENST00000375719ENST00000375732ENST00000481244ENST00000496637ENSG00000169126ENST00000305242ENST00000434029ENST00000467083ENST00000480504ENST00000481659ENST00000486279ENSG00000226016ENST00000454114ENSG00000233472ENST00000425137ENSG00000275036ENST00000621498CIL_00077U_0003ENSMUSG00000057440ENSMUST00000115869ENSMUSG00000061802ENSMUST00000081275ENSMUSG00000094334ENSMUST00000072582
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008366 ENSDART00000077914 N/A N/A N/A 0.062±0.00 N/A N/A 0.355±0.00 N/A 0.256±0.00 N/A N/A N/A N/A N/A
ENSDART00000077915 N/A N/A N/A 0.408±0.09 N/A N/A 2.126±1.71 8.066±0.00 0.122±0.00 N/A 0.261±0.00 N/A N/A N/A
ENSDARG00000055128 ENSDART00000077453 N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A 0.013±0.00 N/A 0.091±0.00 N/A N/A N/A
ENSDART00000152887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153115 N/A N/A N/A 0.404±0.00 N/A N/A 0.098±0.00 N/A N/A N/A 0.153±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150054 ENST00000337532 0.683±0.00 N/A 0.671±0.00 0.591±0.18 1.671±0.00 2.180±0.78 0.430±0.00 1.113±1.01 0.947±0.69 0.955±0.00 1.230±0.06 1.277±0.04 1.692±0.37 1.816±0.00
ENST00000375719 N/A N/A 1.053±0.00 0.771±0.24 1.932±0.00 1.399±0.00 0.913±0.18 0.105±0.00 5.795±0.00 1.934±0.00 N/A 2.469±1.25 2.498±0.00 3.056±0.72
ENST00000375732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A
ENST00000441595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481244 N/A N/A 7.088±0.00 3.499±0.00 N/A 10.622±0.00 3.624±0.00 1.172±0.00 10.435±0.00 9.587±0.00 7.088±0.00 8.613±0.00 N/A 2.805±0.00
ENST00000496637 0.383±0.00 1.889±0.00 0.885±0.00 0.724±0.00 0.999±0.00 3.954±0.00 0.757±0.00 1.308±0.00 N/A 1.441±0.64 N/A 3.517±0.00 1.744±0.84 1.127±0.00
ENSG00000169126 ENST00000305242 0.061±0.00 N/A N/A 0.148±0.07 0.032±0.00 0.068±0.01 0.016±0.00 0.008±0.00 0.137±0.12 0.627±0.25 0.017±0.00 0.459±0.37 0.019±0.01 N/A
ENST00000434029 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.010±0.00 N/A N/A
ENST00000467083 N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.603±0.00 N/A N/A
ENST00000480504 N/A N/A N/A 0.048±0.00 0.232±0.00 N/A N/A N/A N/A 0.709±0.00 N/A N/A N/A N/A
ENST00000481659 0.103±0.00 0.051±0.00 N/A N/A 0.082±0.00 N/A 0.117±0.00 0.141±0.00 N/A N/A N/A N/A N/A N/A
ENST00000486279 N/A N/A N/A N/A N/A N/A N/A N/A 2.307±0.00 N/A N/A 1.173±1.07 N/A N/A
ENSG00000226016 ENST00000454114 N/A 0.188±0.00 N/A 0.067±0.00 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233472 ENST00000425137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00
ENSG00000275036 ENST00000621498 2.739±0.00 1.285±0.00 N/A 2.003±0.00 1.609±0.00 1.973±0.00 0.820±0.00 2.199±0.00 N/A 4.380±0.00 N/A 1.033±0.00 N/A 2.004±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000057440 ENSMUST00000115869 2.231±0.53 0.623±0.18 1.520±0.21 3.211±0.46 1.271±0.35 1.115±0.32 0.521±0.10 1.431±0.80 0.618±0.46 2.842±0.94 0.420±0.08 1.608±0.85 1.847±1.19 0.605±0.26
ENSMUSG00000061802 ENSMUST00000081275 N/A N/A 0.003±0.00 0.118±0.09 N/A 0.046±0.02 0.033±0.02 N/A 0.002±0.00 0.418±0.21 0.011±0.00 1.066±0.38 0.010±0.01 8.056±2.45
ENSMUSG00000094334 ENSMUST00000072582 0.314±0.16 N/A N/A 0.090±0.00 0.386±0.00 N/A N/A 0.249±0.09 0.056±0.03 0.199±0.00 N/A 0.575±0.02 N/A N/A

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