Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	CD2 (cytoplasmic tail) binding protein 2
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000169217	CD2BP2	9606	-	16:30350766-30355361	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000305596		CD2BP2-001	30350766-30355361	protein_coding
	ENST00000564525		CD2BP2-003	30353966-30355291	retained_intron
	ENST00000569466		CD2BP2-002	30352847-30354934	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000305596	5.305±0.00	8.977±0.00	1.135±0.00	7.923±3.79	4.974±2.05	8.648±6.31	3.403±2.30	7.902±7.56	2.026±0.30	8.090±6.25	3.295±2.09	10.335±5.78	10.722±2.90	11.213±2.24
ENST00000569466	22.449±0.00	28.718±0.00	2.352±0.00	10.587±4.75	15.314±9.17	7.884±3.96	6.033±0.00	8.558±0.00	5.813±1.45	6.703±2.13	4.419±2.87	16.911±10.77	27.760±3.96	14.273±2.64

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0004WP	CIL_0004WP_0001	CGP	16:30350766-30370264

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000244	NAS	spliceosomal tri-snRNP complex assembly
GO:0000398	TAS	mRNA splicing, via spliceosome
GO:0005515	IPI:IEA	protein binding
GO:0005634	IDA	nucleus
GO:0005654	IDA	nucleoplasm
GO:0005682	IDA	U5 snRNP
GO:0005737	IDA	cytoplasm
GO:0008380	TAS	RNA splicing
GO:0010467	TAS	gene expression
GO:0010923	IDA	negative regulation of phosphatase activity
GO:0016607	IDA	nuclear speck
GO:0043021	IDA	ribonucleoprotein complex binding

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000027357	cd2bp2	CD2 antigen (cytoplasmic tail) binding protein 2	protein_coding	Danio_rerio
ENSMUSG00000042502	Cd2bp2	CD2 antigen (cytoplasmic tail) binding protein 2	protein_coding	Mus_musculus

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