C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD2 (cytoplasmic tail) binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569466 CD2BP2-002 ENSG00000169217 9606 - 16:30352847-30354934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000569466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000569466 22.449±0.00 28.718±0.00 2.352±0.00 10.587±4.75 15.314±9.17 7.884±3.96 6.033±0.00 8.558±0.00 5.813±1.45 6.703±2.13 4.419±2.87 16.911±10.77 27.760±3.96 14.273±2.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WP CIL_0004WP_0001 CGP 16:30350766-30370264

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000244 NAS spliceosomal tri-snRNP complex assembly
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005682 IDA U5 snRNP
GO:0005737 IDA cytoplasm
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016607 IDA nuclear speck
GO:0043021 IDA ribonucleoprotein complex binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035771 Cd2bp2-201 protein_coding Mus_musculus 0 1197
ENSMUST00000166791 Cd2bp2-202 protein_coding Mus_musculus 0 1197

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