C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD2 (cytoplasmic tail) binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305596 CD2BP2-001 ENSG00000169217 9606 - 16:30350766-30355361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305596
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305596 5.305±0.00 8.977±0.00 1.135±0.00 7.923±3.79 4.974±2.05 8.648±6.31 3.403±2.30 7.902±7.56 2.026±0.30 8.090±6.25 3.295±2.09 10.335±5.78 10.722±2.90 11.213±2.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WP CIL_0004WP_0001 CGP 16:30350766-30370264

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000244 NAS spliceosomal tri-snRNP complex assembly
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005682 IDA U5 snRNP
GO:0005737 IDA cytoplasm
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016607 IDA nuclear speck
GO:0043021 IDA ribonucleoprotein complex binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166791 Cd2bp2-202 protein_coding Mus_musculus 0 1214
ENSMUST00000035771 Cd2bp2-201 protein_coding Mus_musculus 0 1197

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