C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 50 (sugar efflux transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169241 SLC50A1 9606 + 1:155135344-155138857 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303343 SLC50A1-003 155135850-155138852 protein_coding
  ENST00000368401 SLC50A1-002 155135858-155138851 protein_coding
  ENST00000368404 SLC50A1-001 155135850-155138853 protein_coding
  ENST00000368405 SLC50A1-008 155135859-155138851 processed_transcript
  ENST00000465546 SLC50A1-010 155135393-155137596 processed_transcript
  ENST00000475824 SLC50A1-009 155135391-155138094 processed_transcript
  ENST00000479579 SLC50A1-011 155138048-155138853 processed_transcript
  ENST00000484027 SLC50A1-012 155136316-155138574 processed_transcript
  ENST00000484157 SLC50A1-005 155135344-155138368 protein_coding
  ENST00000488609 SLC50A1-006 155135867-155138440 processed_transcript
  ENST00000490276 SLC50A1-004 155135828-155138415 processed_transcript
  ENST00000490770 SLC50A1-007 155135357-155138462 processed_transcript
  ENST00000506037 SLC50A1-013 155135897-155137131 retained_intron
  ENST00000622581 SLC50A1-201 155135812-155138857 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303343ENST00000368401ENST00000368404ENST00000368405ENST00000465546ENST00000475824ENST00000479579ENST00000484027ENST00000484157ENST00000488609ENST00000490770ENST00000622581
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303343 N/A 2.558±0.00 0.510±0.00 N/A N/A 2.704±0.00 N/A N/A N/A N/A N/A 8.437±7.55 6.717±0.00 3.821±0.00
ENST00000368401 N/A 5.115±0.00 N/A N/A N/A 2.550±0.00 1.617±0.00 N/A 4.650±0.00 5.951±0.00 N/A 8.222±0.00 6.322±1.26 4.028±0.00
ENST00000368404 12.287±0.00 4.559±0.00 0.483±0.00 1.532±0.00 4.080±0.56 3.339±2.75 N/A 13.573±0.00 1.767±0.98 16.244±0.00 1.513±0.00 13.594±1.28 16.569±7.66 4.222±2.68
ENST00000368405 N/A 2.811±0.00 N/A 0.521±0.00 N/A N/A 1.398±0.00 4.569±0.00 N/A 0.782±0.00 0.668±0.00 N/A N/A N/A
ENST00000465546 N/A N/A N/A N/A N/A N/A 2.384±0.00 2.580±0.00 N/A N/A N/A N/A N/A N/A
ENST00000475824 N/A N/A N/A N/A N/A N/A N/A N/A 3.157±0.00 N/A N/A N/A N/A N/A
ENST00000479579 N/A 5.645±0.00 N/A 0.475±0.00 4.721±0.00 3.311±0.00 N/A N/A N/A N/A N/A 27.121±0.00 12.421±0.00 3.266±0.00
ENST00000484027 N/A N/A N/A N/A N/A N/A 0.692±0.00 N/A 1.181±0.00 N/A N/A N/A N/A 4.237±0.00
ENST00000484157 N/A N/A 0.953±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488609 N/A N/A N/A N/A N/A 1.533±0.00 N/A N/A 3.111±0.00 N/A 3.454±0.00 2.612±0.00 N/A N/A
ENST00000490770 N/A N/A N/A N/A N/A N/A 0.694±0.00 N/A N/A 8.643±0.00 0.355±0.00 N/A N/A N/A
ENST00000622581 3.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LP CIL_0000LP_0002 CGP 1:155127460-155138857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IC nucleus
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006310 IEA DNA recombination
GO:0008643 IEA carbohydrate transport
GO:0012505 ISS endomembrane system
GO:0016021 IEA integral component of membrane
GO:0042946 IDA glucoside transport
GO:0042947 IDA glucoside transmembrane transporter activity
GO:0045815 ISS positive regulation of gene expression, epigenetic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015158 slc50a1 solute carrier family 50 (sugar transporter), member 1 protein_coding Danio_rerio
ENSMUSG00000027953 Slc50a1 solute carrier family 50 (sugar transporter), member 1 protein_coding Mus_musculus

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