Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	solute carrier family 50 (sugar efflux transporter), member 1
ENST00000368404	SLC50A1-001	ENSG00000169241	9606	+	1:155135850-155138853	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000368404	12.287±0.00	4.559±0.00	0.483±0.00	1.532±0.00	4.080±0.56	3.339±2.75	13.573±0.00	1.767±0.98	16.244±0.00	1.513±0.00	13.594±1.28	16.569±7.66	4.222±2.68

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000LP	CIL_0000LP_0002	CGP	1:155127460-155138857

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005634	IC	nucleus
GO:0005794	IDA	Golgi apparatus
GO:0005886	IDA	plasma membrane
GO:0006310	IEA	DNA recombination
GO:0008643	IEA	carbohydrate transport
GO:0012505	ISS	endomembrane system
GO:0016021	IEA	integral component of membrane
GO:0042946	IDA	glucoside transport
GO:0042947	IDA	glucoside transmembrane transporter activity
GO:0045815	ISS	positive regulation of gene expression, epigenetic

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000029565	Slc50a1-001	protein_coding	Mus_musculus	0	641
ENSMUST00000148095	Slc50a1-004	retained_intron	Mus_musculus	0	486
ENSMUST00000144777	Slc50a1-005	retained_intron	Mus_musculus	0	486
ENSMUST00000132445	Slc50a1-002	retained_intron	Mus_musculus	0	486
ENSMUST00000133575	Slc50a1-003	retained_intron	Mus_musculus	0	383
ENSMUST00000185119	Slc50a1-007	nonsense_mediated_decay	Mus_musculus	0	381
ENSMUST00000130230	Slc50a1-008	protein_coding	Mus_musculus	0	368
ENSMUST00000130690	Slc50a1-009	processed_transcript	Mus_musculus	0	287
ENSMUST00000055984	Isg20l2-001	protein_coding	Mus_musculus	0.000002	58

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