C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 33 (acetyl-CoA transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169359 SLC33A1 9606 - 3:155821024-155854429 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359479 SLC33A1-001 155826526-155854429 protein_coding
  ENST00000392845 SLC33A1-002 155821024-155854378 protein_coding
  ENST00000460729 SLC33A1-004 155844718-155853362 processed_transcript
  ENST00000468581 SLC33A1-005 155828228-155853317 nonsense_mediated_decay
  ENST00000475842 SLC33A1-003 155827958-155853491 protein_coding
  ENST00000496772 SLC33A1-006 155828213-155842605 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359479ENST00000392845ENST00000475842
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359479 4.121±0.00 2.315±0.00 3.555±0.00 1.336±0.44 2.968±0.46 3.216±0.82 2.857±0.07 6.295±2.19 4.103±2.60 3.078±0.03 1.115±0.46 3.957±0.32 3.971±0.54 4.312±1.04
ENST00000392845 N/A 0.613±0.00 N/A 1.110±0.33 0.737±0.00 0.978±0.00 0.846±0.00 4.433±0.00 2.771±0.00 N/A N/A 1.888±0.02 0.443±0.00 2.214±0.00
ENST00000475842 N/A N/A N/A 2.319±0.00 2.380±0.00 N/A N/A 5.667±0.00 1.882±0.00 4.618±0.00 N/A 2.635±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SM CIL_0004SM_0002 CGP 3:155762617-155854429
CIL_0004SN CIL_0004SN_0002 CGP 3:155821024-155944026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0008219 IEA cell death
GO:0008521 IEA acetyl-CoA transporter activity
GO:0015876 IEA acetyl-CoA transport
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020085 slc33a1 solute carrier family 33 (acetyl-CoA transporter), member 1 protein_coding Danio_rerio
ENSMUSG00000027822 Slc33a1 solute carrier family 33 (acetyl-CoA transporter), member 1 protein_coding Mus_musculus

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