C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 33 (acetyl-CoA transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392845 SLC33A1-002 ENSG00000169359 9606 - 3:155821024-155854378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000392845
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000392845 0.613±0.00 1.110±0.33 0.737±0.00 0.978±0.00 0.846±0.00 4.433±0.00 2.771±0.00 1.888±0.02 0.443±0.00 2.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SM CIL_0004SM_0002 CGP 3:155762617-155854429
CIL_0004SN CIL_0004SN_0002 CGP 3:155821024-155944026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0008219 IEA cell death
GO:0008521 IEA acetyl-CoA transporter activity
GO:0015876 IEA acetyl-CoA transport
GO:0016020 IDA:IEA membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029402 Slc33a1-001 protein_coding Mus_musculus 0 2555
ENSMUST00000160883 Slc33a1-003 protein_coding Mus_musculus 0 2047
ENSMUST00000161659 Slc33a1-002 protein_coding Mus_musculus 0 2045
ENSMUST00000156289 Rgs20-006 retained_intron Mus_musculus 0.00005 57

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