C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, non-receptor type 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169410 PTPN9 9606 - 15:75463251-75579289 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306726 PTPN9-201 75467127-75579289 protein_coding
  ENST00000561731 PTPN9-004 75513191-75524274 protein_coding
  ENST00000563835 PTPN9-002 75469810-75479916 processed_transcript
  ENST00000564970 PTPN9-005 75487288-75505816 processed_transcript
  ENST00000568108 PTPN9-003 75468861-75470909 retained_intron
  ENST00000618819 PTPN9-001 75463251-75579289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306726ENST00000568108ENST00000618819
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306726 6.138±0.00 7.371±0.00 1.087±0.00 5.241±2.96 3.339±1.46 4.517±2.22 2.491±2.06 5.125±4.05 2.838±0.93 5.373±2.12 1.060±0.76 6.636±2.13 10.804±2.11 9.218±1.09
ENST00000568108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.193±0.00 N/A N/A N/A
ENST00000618819 N/A N/A 0.414±0.00 0.316±0.00 0.590±0.00 0.369±0.00 N/A N/A 0.421±0.00 N/A N/A 0.416±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000F8 CIL_0000F8_0002 CGP 15:75369379-75579289
CIL_0005A2 CIL_0005A2_0002 CGP 15:75463251-75626469

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0004726 TAS non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077495 ptpn9a protein tyrosine phosphatase, non-receptor type 9, a protein_coding Danio_rerio
ENSMUSG00000032290 Ptpn9 protein tyrosine phosphatase, non-receptor type 9 protein_coding Mus_musculus

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