C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005A2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077495-ENSDARG00000008395 CGP 7955 25:6752339-6800991
GeneTranscriptPositionBiotype
ENSDARG00000008395 (snupn)
snurportin 1
ENSDART00000012820 (snupn-001) 6788855-6800991 protein_coding
ENSDART00000139606 (snupn-002) 6795362-6800917 processed_transcript
ENSDARG00000077495 (ptpn9a)
protein tyrosine phosphatase, non-receptor type 9, a
ENSDART00000110389 (ptpn9a-201) 6752339-6784634 protein_coding
ENSDART00000153768 (ptpn9a-001) 6756992-6773956 protein_coding
CIL_0005A2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169410-ENSG00000169371 CGP 9606 15:75463251-75626469
GeneTranscriptPositionBiotype
ENSG00000169371 (SNUPN)
snurportin 1
ENST00000308588 (SNUPN-001) 75598083-75625815 protein_coding
ENST00000563793 (SNUPN-008) 75617520-75625179 protein_coding
ENST00000563875 (SNUPN-007) 75621046-75625663 protein_coding
ENST00000564086 (SNUPN-005) 75609890-75626469 protein_coding
ENST00000564644 (SNUPN-002) 75598089-75625688 protein_coding
ENST00000564675 (SNUPN-003) 75598122-75625693 protein_coding
ENST00000567134 (SNUPN-004) 75598083-75625794 protein_coding
ENST00000567437 (SNUPN-011) 75598508-75605364 retained_intron
ENST00000568078 (SNUPN-010) 75600791-75617524 protein_coding
ENST00000568162 (SNUPN-009) 75617409-75625638 protein_coding
ENST00000569817 (SNUPN-006) 75605199-75626159 protein_coding
ENSG00000169410 (PTPN9)
protein tyrosine phosphatase, non-receptor type 9
ENST00000306726 (PTPN9-201) 75467127-75579289 protein_coding
ENST00000561731 (PTPN9-004) 75513191-75524274 protein_coding
ENST00000563835 (PTPN9-002) 75469810-75479916 processed_transcript
ENST00000564970 (PTPN9-005) 75487288-75505816 processed_transcript
ENST00000568108 (PTPN9-003) 75468861-75470909 retained_intron
ENST00000618819 (PTPN9-001) 75463251-75579289 protein_coding
ENSG00000259931 (CTD-2323K18.2)
ENST00000566222 (CTD-2323K18.2-001) 75512770-75513040 processed_pseudogene
ENSG00000260165 (CTD-2323K18.3)
ENST00000569468 (CTD-2323K18.3-001) 75480661-75480836 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A2_0001ENSDARG00000008395ENSDART00000012820ENSDART00000139606ENSDARG00000077495ENSDART00000110389ENSDART00000153768CIL_0005A2_0002ENSG00000169371ENST00000308588ENST00000563793ENST00000563875ENST00000564086ENST00000564644ENST00000564675ENST00000567134ENST00000567437ENST00000568078ENST00000568162ENST00000569817ENSG00000169410ENST00000306726ENST00000561731ENST00000563835ENST00000564970ENST00000568108ENST00000618819ENSG00000259931ENST00000566222ENSG00000260165ENST00000569468
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A2_0001ENSDARG00000008395ENSDART00000012820ENSDARG00000077495ENSDART00000110389ENSDART00000153768CIL_0005A2_0002ENSG00000169371ENST00000308588ENST00000564086ENST00000564675ENSG00000169410ENST00000306726ENST00000568108ENST00000618819ENSG00000259931ENST00000566222ENSG00000260165ENST00000569468
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008395 ENSDART00000012820 N/A N/A N/A 4.139±3.17 N/A N/A 6.545±2.42 11.092±3.27 1.841±0.00 N/A 1.700±0.00 N/A N/A N/A
ENSDART00000139606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000077495 ENSDART00000110389 N/A N/A N/A 6.413±1.66 N/A N/A 1.974±0.23 1.232±0.44 0.446±0.00 N/A 1.173±0.00 N/A N/A N/A
ENSDART00000153768 N/A N/A N/A N/A N/A N/A 4.348±0.38 2.317±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169371 ENST00000308588 N/A 10.735±0.00 N/A 4.438±1.54 6.220±3.78 7.737±0.00 4.827±0.00 6.548±5.35 3.041±2.03 5.498±1.87 3.355±1.76 12.872±0.63 10.742±2.41 25.632±4.83
ENST00000563793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.232±0.00 N/A N/A
ENST00000564644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564675 N/A N/A N/A 1.313±0.00 N/A 1.177±0.00 0.823±0.00 N/A 1.133±0.00 N/A 2.756±0.00 2.441±0.00 N/A N/A
ENST00000567134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169410 ENST00000306726 6.138±0.00 7.371±0.00 1.087±0.00 5.241±2.96 3.339±1.46 4.517±2.22 2.491±2.06 5.125±4.05 2.838±0.93 5.373±2.12 1.060±0.76 6.636±2.13 10.804±2.11 9.218±1.09
ENST00000561731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.193±0.00 N/A N/A N/A
ENST00000618819 N/A N/A 0.414±0.00 0.316±0.00 0.590±0.00 0.369±0.00 N/A N/A 0.421±0.00 N/A N/A 0.416±0.00 N/A N/A
ENSG00000259931 ENST00000566222 N/A 0.040±0.00 N/A 0.117±0.00 N/A N/A N/A N/A 1.740±0.00 N/A N/A 0.233±0.09 0.172±0.00 N/A
ENSG00000260165 ENST00000569468 0.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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