C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dihydrouridine synthase 1-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169718 DUS1L 9606 - 17:82057506-82065887 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306796 DUS1L-001 82057506-82065639 protein_coding
  ENST00000354321 DUS1L-002 82057872-82065545 protein_coding
  ENST00000538833 DUS1L-005 82057882-82062973 protein_coding
  ENST00000542088 DUS1L-013 82057914-82060775 protein_coding
  ENST00000577574 DUS1L-016 82057880-82060094 protein_coding
  ENST00000577907 DUS1L-008 82062882-82065794 protein_coding
  ENST00000578176 DUS1L-007 82061258-82065797 protein_coding
  ENST00000578264 DUS1L-010 82060701-82064255 retained_intron
  ENST00000578428 DUS1L-014 82058487-82060303 retained_intron
  ENST00000578846 DUS1L-004 82057880-82063477 retained_intron
  ENST00000578907 DUS1L-009 82061209-82065783 protein_coding
  ENST00000579854 DUS1L-015 82057905-82060140 retained_intron
  ENST00000580731 DUS1L-011 82058341-82061695 nonsense_mediated_decay
  ENST00000582407 DUS1L-012 82060158-82060951 retained_intron
  ENST00000582529 DUS1L-006 82060877-82065887 protein_coding
  ENST00000584871 DUS1L-017 82058016-82059141 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306796ENST00000354321ENST00000538833ENST00000542088ENST00000577574ENST00000577907ENST00000578264ENST00000578846ENST00000578907ENST00000579854ENST00000580731ENST00000582529ENST00000584871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306796 N/A N/A 0.639±0.00 N/A N/A 0.649±0.00 0.211±0.00 N/A N/A 0.178±0.00 N/A N/A 6.512±0.00 N/A
ENST00000354321 N/A N/A N/A 1.073±0.00 N/A N/A N/A 2.883±0.00 N/A N/A N/A 7.980±2.75 3.815±0.00 12.719±3.03
ENST00000538833 16.764±0.00 34.444±0.00 1.257±0.00 2.663±1.64 27.998±0.00 14.450±0.00 4.346±4.19 13.427±0.00 14.177±13.59 12.657±0.00 7.776±5.78 10.832±6.49 11.648±5.32 16.945±9.71
ENST00000542088 N/A 23.871±0.00 N/A 5.332±0.00 N/A N/A N/A N/A 0.980±0.00 8.563±0.00 N/A 12.734±2.44 N/A N/A
ENST00000577574 N/A N/A N/A N/A N/A N/A N/A 7.753±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577907 N/A N/A N/A N/A N/A N/A 10.307±0.00 N/A N/A 1.059±0.00 11.597±5.37 N/A N/A N/A
ENST00000578264 N/A N/A N/A N/A N/A N/A N/A 2.425±0.00 N/A N/A 1.037±0.00 N/A N/A N/A
ENST00000578846 N/A N/A N/A 1.027±0.00 N/A 0.267±0.00 0.055±0.00 N/A 0.167±0.00 2.042±0.00 N/A 2.320±0.00 N/A 1.694±0.00
ENST00000578907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.676±0.00 N/A N/A
ENST00000579854 N/A N/A N/A 4.393±0.00 N/A 13.092±0.00 8.671±0.00 13.110±0.00 23.383±0.00 N/A 19.076±0.00 N/A 11.031±0.00 N/A
ENST00000580731 N/A N/A 2.525±0.00 1.322±0.00 N/A 2.029±0.00 N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A
ENST00000582529 N/A 21.608±0.00 N/A 1.325±0.00 13.052±11.32 6.237±3.15 4.223±3.69 N/A 10.693±9.48 5.459±4.87 15.594±0.00 14.827±3.58 14.518±4.06 10.611±0.00
ENST00000584871 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.689±0.00 N/A 0.990±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VJ CIL_0004VJ_0001 CGP 17:82050691-82065887
CIL_0004VI CIL_0004VI_0001 CGP 17:82057506-82098332

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002943 IEA tRNA dihydrouridine synthesis
GO:0008033 IEA tRNA processing
GO:0017150 IEA tRNA dihydrouridine synthase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089260 dus1l dihydrouridine synthase 1-like (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000025155 Dus1l dihydrouridine synthase 1-like (S. cerevisiae) protein_coding Mus_musculus

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