C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydrouridine synthase 1-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538833 DUS1L-005 ENSG00000169718 9606 - 17:82057882-82062973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000538833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000538833 16.764±0.00 34.444±0.00 1.257±0.00 2.663±1.64 27.998±0.00 14.450±0.00 4.346±4.19 13.427±0.00 14.177±13.59 12.657±0.00 7.776±5.78 10.832±6.49 11.648±5.32 16.945±9.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VJ CIL_0004VJ_0001 CGP 17:82050691-82065887
CIL_0004VI CIL_0004VI_0001 CGP 17:82057506-82098332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008033 IEA tRNA processing
GO:0017150 IEA tRNA dihydrouridine synthase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167023 Dus1l-201 protein_coding Mus_musculus 0 1013
ENSMUST00000106133 Dus1l-003 protein_coding Mus_musculus 0 922
ENSMUST00000026151 Dus1l-002 protein_coding Mus_musculus 0 922
ENSMUST00000106135 Dus1l-001 protein_coding Mus_musculus 0 922
ENSMUST00000143139 Dus1l-006 protein_coding Mus_musculus 0 246
ENSMUST00000146008 Dus1l-004 retained_intron Mus_musculus 5e-32 143
ENSMUST00000129955 Dus1l-005 protein_coding Mus_musculus 3e-29 134

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