C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dihydrouridine synthase 1-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025155 Dus1l 10090 - 11:120789201-120796403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026151 Dus1l-002 120789202-120796395 protein_coding
  ENSMUST00000106133 Dus1l-003 120789206-120796398 protein_coding
  ENSMUST00000106135 Dus1l-001 120789201-120796403 protein_coding
  ENSMUST00000125156 Dus1l-008 120789204-120789850 retained_intron
  ENSMUST00000129955 Dus1l-005 120793845-120796393 protein_coding
  ENSMUST00000142418 Dus1l-007 120789202-120790447 retained_intron
  ENSMUST00000143139 Dus1l-006 120792774-120796377 protein_coding
  ENSMUST00000146008 Dus1l-004 120789206-120796389 retained_intron
  ENSMUST00000167023 Dus1l-201 120789202-120796395 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106135ENSMUST00000129955ENSMUST00000142418ENSMUST00000143139ENSMUST00000146008ENSMUST00000167023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106135 4.295±0.00 7.147±1.12 N/A N/A 3.659±0.70 5.793±1.21 1.516±0.70 5.930±1.09 7.350±2.10 3.406±1.00 N/A 6.468±1.55 6.722±0.00 12.811±0.96
ENSMUST00000129955 5.505±0.47 11.999±1.84 N/A N/A 6.770±2.23 5.645±1.45 2.129±0.18 5.860±0.00 9.122±2.69 4.589±0.59 N/A 8.827±2.81 N/A N/A
ENSMUST00000142418 5.956±0.00 N/A 4.684±0.32 5.636±0.00 4.205±0.22 N/A 1.492±0.00 N/A N/A 3.361±0.00 N/A 6.468±0.10 N/A N/A
ENSMUST00000143139 7.200±0.00 29.279±6.48 N/A N/A 7.053±0.00 6.153±1.15 4.251±0.00 8.133±1.62 14.956±3.94 5.829±1.36 N/A N/A N/A 17.620±0.46
ENSMUST00000146008 3.147±0.91 2.965±0.54 2.633±0.43 2.920±0.51 2.522±0.47 1.976±0.27 1.016±0.18 1.860±0.23 2.729±0.62 2.407±0.51 1.388±0.16 3.549±0.81 2.896±0.10 N/A
ENSMUST00000167023 4.471±0.17 5.136±0.74 7.852±1.19 9.981±5.34 3.842±0.69 2.408±0.40 2.584±0.08 6.043±0.62 11.056±5.96 3.730±0.35 5.453±3.61 9.860±5.78 16.519±6.95 8.124±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VJ CIL_0004VJ_0002 CGP 11:120784272-120796403
CIL_0004VI CIL_0004VI_0002 CGP 11:120789201-120824178

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002943 IEA tRNA dihydrouridine synthesis
GO:0005575 ND cellular_component
GO:0017150 IEA tRNA dihydrouridine synthase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089260 dus1l dihydrouridine synthase 1-like (S. cerevisiae) protein_coding Danio_rerio
ENSG00000169718 DUS1L dihydrouridine synthase 1-like (S. cerevisiae) protein_coding Homo_sapiens

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