C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 15 open reading frame 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169758 C15orf27 9606 + 15:76059837-76229121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000388942 C15orf27-001 76059837-76204963 protein_coding
  ENST00000484722 C15orf27-002 76059958-76204962 nonsense_mediated_decay
  ENST00000558249 C15orf27-003 76191469-76204962 retained_intron
  ENST00000559079 C15orf27-004 76059985-76114203 processed_transcript
  ENST00000561302 C15orf27-005 76059985-76229121 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000388942ENST00000484722ENST00000558249ENST00000559079ENST00000561302
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000388942 N/A N/A 0.674±0.58 N/A N/A N/A N/A N/A N/A 0.039±0.00 1.596±0.00 N/A
ENST00000484722 0.501±0.00 0.328±0.00 0.859±0.00 0.161±0.00 N/A N/A N/A 0.275±0.00 1.030±0.75 N/A 3.287±1.20 2.657±0.00
ENST00000558249 N/A 0.177±0.00 N/A N/A 0.029±0.00 N/A 0.735±0.52 N/A N/A 0.221±0.22 N/A N/A
ENST00000559079 N/A N/A N/A 0.159±0.00 0.022±0.01 N/A N/A 0.119±0.09 N/A 0.049±0.00 N/A N/A
ENST00000561302 N/A 0.298±0.00 0.242±0.00 0.878±0.33 0.225±0.00 0.019±0.00 N/A 0.099±0.00 0.761±0.00 0.705±0.46 3.884±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024A CIL_00024A_0001 CGP 15:75935969-76229121
CIL_000247 CIL_000247_0001 CGP 15:76059837-76311472

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005245 IBA voltage-gated calcium channel activity
GO:0005886 IBA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0070509 IBA calcium ion import
GO:0070588 IBA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061532 C25H15orf27 chromosome 15 open reading frame 27 protein_coding Danio_rerio
ENSMUSG00000032313 AI118078 expressed sequence AI118078 protein_coding Mus_musculus

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