C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AI118078
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032313 AI118078 10090 + 9:55326913-55438345 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034862 AI118078-001 55326949-55438345 protein_coding
  ENSMUST00000085754 AI118078-002 55326913-55438345 protein_coding
  ENSMUST00000130465 AI118078-003 55333201-55437358 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034862ENSMUST00000085754ENSMUST00000130465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034862 0.079±0.01 0.606±0.24 0.147±0.00 1.109±0.38 0.251±0.14 0.527±0.10 0.702±0.30 0.119±0.06 0.244±0.29 0.139±0.02 0.699±0.30 2.153±1.54 0.423±0.50 0.184±0.11
ENSMUST00000085754 N/A N/A N/A N/A 0.047±0.02 N/A N/A 0.012±0.00 0.074±0.00 N/A N/A 0.194±0.08 0.047±0.02 0.037±0.02
ENSMUST00000130465 0.115±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024A CIL_00024A_0002 CGP 9:55220222-55438345
CIL_000247 CIL_000247_0002 CGP 9:55326913-55512243

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005245 IBA voltage-gated calcium channel activity
GO:0005886 IBA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0070509 IBA calcium ion import
GO:0070588 IBA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061532 C25H15orf27 chromosome 15 open reading frame 27 protein_coding Danio_rerio
ENSG00000169758 C15orf27 chromosome 15 open reading frame 27 protein_coding Homo_sapiens

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