C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 15 open reading frame 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000388942 C15orf27-001 ENSG00000169758 9606 + 15:76059837-76204963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENST00000388942
Transcript ID Brain Ovary Placenta
ENST00000388942 0.674±0.58 0.039±0.00 1.596±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024A CIL_00024A_0001 CGP 15:75935969-76229121
CIL_000247 CIL_000247_0001 CGP 15:76059837-76311472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IBA voltage-gated calcium channel activity
GO:0005886 IBA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0070509 IBA calcium ion import
GO:0070588 IBA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034862 AI118078-001 protein_coding Mus_musculus 0 2065
ENSMUST00000085754 AI118078-002 protein_coding Mus_musculus 0 1086

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