C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Neuron-specific protein family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170091 HMP19 9606 + 5:174045604-174243501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303177 HMP19-001 174045604-174109179 protein_coding
  ENST00000517587 HMP19-009 174045706-174107356 nonsense_mediated_decay
  ENST00000517902 HMP19-008 174045706-174064475 retained_intron
  ENST00000519717 HMP19-012 174046659-174107505 protein_coding
  ENST00000519867 HMP19-010 174045715-174107426 protein_coding
  ENST00000521146 HMP19-007 174091205-174108346 processed_transcript
  ENST00000521278 HMP19-011 174046093-174107465 protein_coding
  ENST00000521585 HMP19-002 174045744-174243501 protein_coding
  ENST00000521959 HMP19-006 174062572-174108447 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000303177ENST00000517902ENST00000519717ENST00000519867ENST00000521146ENST00000521278ENST00000521585
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000303177 N/A 0.007±0.00 N/A 50.402±9.96 0.054±0.02 1.255±0.00 0.022±0.01 N/A N/A 0.030±0.01 0.020±0.01 0.055±0.02 2.317±0.00
ENST00000517902 N/A N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A
ENST00000519717 0.016±0.00 N/A 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519867 N/A N/A N/A N/A N/A 0.794±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000521146 N/A N/A N/A N/A 0.361±0.00 N/A N/A N/A N/A N/A 0.028±0.00 0.050±0.00 7.469±0.00
ENST00000521278 0.017±0.00 N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.277±0.00 N/A N/A N/A N/A
ENST00000521585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.415±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YY CIL_0006YY_0001 CGP 5:173973779-174243501

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0007212 IEA dopamine receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0032051 IEA clathrin light chain binding
GO:0048268 IEA clathrin coat assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053663 hmp19 HMP19 protein protein_coding Danio_rerio
ENSMUSG00000020297 Nsg2 neuron specific gene family member 2 protein_coding Mus_musculus

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