C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185056-ENSG00000170091 CGP 9606 5:173973779-174243501
GeneTranscriptPositionBiotype
ENSG00000170091 (HMP19)
Neuron-specific protein family member 2 		ENST00000303177 (HMP19-001) 174045604-174109179 protein_coding
ENST00000517587 (HMP19-009) 174045706-174107356 nonsense_mediated_decay
ENST00000517902 (HMP19-008) 174045706-174064475 retained_intron
ENST00000519717 (HMP19-012) 174046659-174107505 protein_coding
ENST00000519867 (HMP19-010) 174045715-174107426 protein_coding
ENST00000521146 (HMP19-007) 174091205-174108346 processed_transcript
ENST00000521278 (HMP19-011) 174046093-174107465 protein_coding
ENST00000521585 (HMP19-002) 174045744-174243501 protein_coding
ENST00000521959 (HMP19-006) 174062572-174108447 processed_transcript
ENSG00000185056 (C5orf47)
chromosome 5 open reading frame 47 		ENST00000340147 (C5orf47-001) 173989159-174006140 protein_coding
ENST00000522195 (C5orf47-002) 173973779-174005196 processed_transcript
ENSG00000253109 (RP11-619L12.1)
 ENST00000519073 (RP11-619L12.1-001) 174039751-174040240 processed_pseudogene
ENSG00000253447 (RP11-619L12.4)
 ENST00000517582 (RP11-619L12.4-001) 174081506-174086559 antisense
ENST00000519942 (RP11-619L12.4-002) 174081518-174086542 antisense
ENST00000520190 (RP11-619L12.4-003) 174082275-174086475 antisense
ENSG00000254011 (CTC-229L21.1)
 ENST00000520587 (CTC-229L21.1-001) 174173101-174181814 sense_intronic
CIL_0006YY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020299-ENSMUSG00000020297 CGP 10090 11:31965592-32059202
GeneTranscriptPositionBiotype
ENSMUSG00000020297 (Nsg2)
neuron specific gene family member 2 		ENSMUST00000020537 (Nsg2-001) 32000463-32059202 protein_coding
ENSMUST00000093219 (Nsg2-003) 32000502-32033414 protein_coding
ENSMUST00000109409 (Nsg2-002) 32000463-32018007 protein_coding
ENSMUSG00000020299 (4930524B15Rik)
RIKEN cDNA 4930524B15 gene 		ENSMUST00000102829 (4930524B15Rik-001) 31965592-31979651 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YY_0001ENSG00000170091ENST00000303177ENST00000517587ENST00000517902ENST00000519717ENST00000519867ENST00000521146ENST00000521278ENST00000521585ENST00000521959ENSG00000185056ENST00000340147ENST00000522195ENSG00000253109ENST00000519073ENSG00000253447ENST00000517582ENST00000519942ENST00000520190ENSG00000254011ENST00000520587CIL_0006YY_0002ENSMUSG00000020297ENSMUST00000020537ENSMUST00000093219ENSMUST00000109409ENSMUSG00000020299ENSMUST00000102829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YY_0001ENSG00000170091ENST00000303177ENST00000517902ENST00000519717ENST00000519867ENST00000521146ENST00000521278ENST00000521585ENSG00000185056ENST00000340147ENST00000522195ENSG00000253109ENST00000519073ENSG00000253447ENST00000517582ENST00000519942ENST00000520190ENSG00000254011ENST00000520587CIL_0006YY_0002ENSMUSG00000020297ENSMUST00000020537ENSMUST00000093219ENSMUST00000109409ENSMUSG00000020299ENSMUST00000102829
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170091 ENST00000303177 N/A 0.007±0.00 N/A 50.402±9.96 0.054±0.02 1.255±0.00 0.022±0.01 N/A N/A N/A 0.030±0.01 0.020±0.01 0.055±0.02 2.317±0.00
ENST00000517587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517902 N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A
ENST00000519717 0.016±0.00 N/A 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519867 N/A N/A N/A N/A N/A 0.794±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521146 N/A N/A N/A N/A 0.361±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00 0.050±0.00 7.469±0.00
ENST00000521278 0.017±0.00 N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A 0.277±0.00 N/A N/A N/A N/A
ENST00000521585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.415±0.00
ENST00000521959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185056 ENST00000340147 N/A 0.020±0.00 N/A 0.083±0.03 0.012±0.00 N/A 0.079±0.00 N/A N/A N/A N/A 0.028±0.00 0.015±0.00 6.366±0.84
ENST00000522195 N/A N/A N/A 0.132±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A 0.022±0.00 0.024±0.00 N/A
ENSG00000253109 ENST00000519073 N/A N/A 0.451±0.00 N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A 0.189±0.06
ENSG00000253447 ENST00000517582 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.359±0.00
ENST00000519942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.780±3.91
ENST00000520190 N/A N/A N/A N/A N/A 0.327±0.00 N/A N/A N/A N/A N/A N/A N/A 0.549±0.00
ENSG00000254011 ENST00000520587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020297 ENSMUST00000020537 1.282±1.20 12.141±2.45 1.293±0.16 273.311±116.66 6.443±3.22 4.564±0.52 0.480±0.06 1.683±0.50 0.200±0.39 1.068±0.06 0.185±0.27 0.975±0.59 0.133±0.14 0.041±0.01
ENSMUST00000093219 N/A N/A N/A N/A 0.978±0.16 N/A 0.137±0.05 N/A 0.029±0.01 N/A 0.026±0.00 0.241±0.00 N/A N/A
ENSMUST00000109409 0.258±0.05 N/A N/A N/A N/A N/A N/A 1.004±0.13 N/A N/A N/A 0.781±0.33 N/A 0.033±0.00
ENSMUSG00000020299 ENSMUST00000102829 0.018±0.00 0.132±0.11 0.014±0.01 0.020±0.01 0.029±0.01 N/A N/A 0.022±0.00 0.020±0.01 0.086±0.01 N/A 0.039±0.02 0.022±0.01 12.520±5.55

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