C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuron specific gene family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020297 Nsg2 10090 + 11:32000463-32059202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020537 Nsg2-001 32000463-32059202 protein_coding
  ENSMUST00000093219 Nsg2-003 32000502-32033414 protein_coding
  ENSMUST00000109409 Nsg2-002 32000463-32018007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020537ENSMUST00000093219ENSMUST00000109409
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020537 1.282±1.20 12.141±2.45 1.293±0.16 273.311±116.66 6.443±3.22 4.564±0.52 0.480±0.06 1.683±0.50 0.200±0.39 1.068±0.06 0.185±0.27 0.975±0.59 0.133±0.14 0.041±0.01
ENSMUST00000093219 N/A N/A N/A N/A 0.978±0.16 N/A 0.137±0.05 N/A 0.029±0.01 N/A 0.026±0.00 0.241±0.00 N/A N/A
ENSMUST00000109409 0.258±0.05 N/A N/A N/A N/A N/A N/A 1.004±0.13 N/A N/A N/A 0.781±0.33 N/A 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344
CIL_0006YY CIL_0006YY_0002 CGP 11:31965592-32059202

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0007212 IEA dopamine receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0032051 IEA clathrin light chain binding
GO:0048268 IEA clathrin coat assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053663 hmp19 HMP19 protein protein_coding Danio_rerio
ENSG00000170091 HMP19 Neuron-specific protein family member 2 protein_coding Homo_sapiens

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