C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PR domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170325 PRDM10 9606 - 11:129899706-130002835 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304538 PRDM10-004 129899715-129947553 protein_coding
  ENST00000358825 PRDM10-005 129899706-130002835 protein_coding
  ENST00000360871 PRDM10-001 129899715-130002835 protein_coding
  ENST00000423662 PRDM10-006 129899717-129947622 protein_coding
  ENST00000526082 PRDM10-008 129902285-129947461 protein_coding
  ENST00000527581 PRDM10-009 129947186-130002804 protein_coding
  ENST00000528746 PRDM10-003 129899717-130002835 protein_coding
  ENST00000531431 PRDM10-010 129948056-130002785 protein_coding
  ENST00000533431 PRDM10-007 129902340-129942590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304538ENST00000358825ENST00000360871ENST00000423662ENST00000526082ENST00000527581ENST00000528746ENST00000531431ENST00000533431
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304538 0.795±0.00 0.660±0.00 0.143±0.00 0.358±0.07 N/A 0.417±0.06 N/A N/A 0.216±0.00 N/A 1.346±0.00 N/A 0.565±0.00 0.489±0.17
ENST00000358825 N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A
ENST00000360871 0.256±0.00 0.247±0.00 N/A 0.152±0.00 N/A 0.857±0.00 0.078±0.00 N/A 0.233±0.00 0.807±0.00 0.687±0.00 0.826±0.28 0.498±0.28 N/A
ENST00000423662 N/A N/A N/A N/A 0.549±0.32 N/A N/A N/A N/A 0.543±0.00 N/A 0.382±0.00 N/A N/A
ENST00000526082 N/A N/A N/A 0.410±0.00 0.323±0.00 N/A N/A 0.157±0.00 N/A N/A N/A 0.508±0.18 N/A N/A
ENST00000527581 N/A N/A N/A N/A N/A N/A N/A N/A 1.890±0.00 N/A N/A N/A N/A N/A
ENST00000528746 N/A 0.478±0.00 0.335±0.00 0.757±0.00 0.230±0.00 0.229±0.00 N/A 0.320±0.00 0.183±0.00 N/A N/A N/A N/A 0.734±0.00
ENST00000531431 N/A N/A 1.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533431 N/A N/A 0.268±0.00 0.610±0.00 N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000511 CIL_000511_0002 CGP 11:129899706-130144811

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022161 prdm10 PR domain containing 10 protein_coding Danio_rerio
ENSMUSG00000042496 Prdm10 PR domain containing 10 protein_coding Mus_musculus

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