C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360871 PRDM10-001 ENSG00000170325 9606 - 11:129899715-130002835 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartLiverLungMuscleOvaryPlacentaENST00000360871
Transcript ID Adipose Adrenal Brain Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000360871 0.256±0.00 0.247±0.00 0.152±0.00 0.857±0.00 0.078±0.00 0.233±0.00 0.807±0.00 0.687±0.00 0.826±0.28 0.498±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000511 CIL_000511_0002 CGP 11:129899706-130144811

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074510 Prdm10-201 protein_coding Mus_musculus 0 2348
ENSMUST00000117389 Prdm10-001 protein_coding Mus_musculus 0 1144
ENSMUST00000136144 Prdm10-002 retained_intron Mus_musculus 0 880

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