C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000511_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022161-ENSDARG00000054864 CGP 7955 18:42722094-42943595
GeneTranscriptPositionBiotype
ENSDARG00000054864 (aplp2)
amyloid beta (A4) precursor-like protein 2 		ENSDART00000077125 (aplp2-001) 42781185-42943595 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000511_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170325-ENSG00000084234 CGP 9606 11:129899706-130144811
GeneTranscriptPositionBiotype
ENSG00000084234 (APLP2)
amyloid beta (A4) precursor-like protein 2 		ENST00000263574 (APLP2-005) 130069906-130144811 protein_coding
ENST00000278756 (APLP2-008) 130070568-130144804 protein_coding
ENST00000338167 (APLP2-001) 130069921-130144405 protein_coding
ENST00000345598 (APLP2-002) 130069916-130143679 protein_coding
ENST00000461918 (APLP2-016) 130108605-130109602 retained_intron
ENST00000525215 (APLP2-017) 130109161-130110573 retained_intron
ENST00000525604 (APLP2-026) 130141412-130144273 retained_intron
ENST00000526330 (APLP2-022) 130069894-130122377 processed_transcript
ENST00000527702 (APLP2-020) 130069894-130121766 processed_transcript
ENST00000528499 (APLP2-003) 130069894-130143806 protein_coding
ENST00000529235 (APLP2-028) 130069894-130120823 processed_transcript
ENST00000529483 (APLP2-030) 130109427-130120817 processed_transcript
ENST00000529701 (APLP2-021) 130069894-130122470 processed_transcript
ENST00000530132 (APLP2-010) 130069894-130110560 nonsense_mediated_decay
ENST00000530493 (APLP2-025) 130140495-130143434 retained_intron
ENST00000532456 (APLP2-029) 130069837-130110637 processed_transcript
ENST00000533195 (APLP2-011) 130069894-130110659 protein_coding
ENST00000533532 (APLP2-014) 130069894-130109823 retained_intron
ENST00000533616 (APLP2-009) 130069837-130143522 nonsense_mediated_decay
ENST00000533618 (APLP2-015) 130069894-130120777 retained_intron
ENST00000533713 (APLP2-027) 130069894-130120823 protein_coding
ENST00000533860 (APLP2-024) 130138778-130143575 retained_intron
ENST00000534001 (APLP2-031) 130069894-130121783 processed_transcript
ENST00000534582 (APLP2-018) 130069894-130121726 nonsense_mediated_decay
ENST00000534761 (APLP2-023) 130069891-130121718 processed_transcript
ENSG00000170325 (PRDM10)
PR domain containing 10 		ENST00000304538 (PRDM10-004) 129899715-129947553 protein_coding
ENST00000358825 (PRDM10-005) 129899706-130002835 protein_coding
ENST00000360871 (PRDM10-001) 129899715-130002835 protein_coding
ENST00000423662 (PRDM10-006) 129899717-129947622 protein_coding
ENST00000526082 (PRDM10-008) 129902285-129947461 protein_coding
ENST00000527581 (PRDM10-009) 129947186-130002804 protein_coding
ENST00000528746 (PRDM10-003) 129899717-130002835 protein_coding
ENST00000531431 (PRDM10-010) 129948056-130002785 protein_coding
ENST00000533431 (PRDM10-007) 129902340-129942590 protein_coding
ENSG00000233220 (LINC00167)
long intergenic non-protein coding RNA 167 		ENST00000530583 (LINC00167-002) 130002938-130004356 lincRNA
ENSG00000244451 (RPL34P21)
ribosomal protein L34 pseudogene 21 		ENST00000487566 (RPL34P21-001) 130082495-130082781 processed_pseudogene
ENSG00000255057 (RP11-567M21.3)
 ENST00000525666 (RP11-567M21.3-001) 130008586-130009765 processed_pseudogene
ENSG00000255262 (TCEB2P2)
transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) pseudogene 2 		ENST00000526184 (TCEB2P2-001) 130032866-130033220 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000511_0001ENSDARG00000054864ENSDART00000077125CIL_000511_0002ENSG00000084234ENST00000263574ENST00000278756ENST00000338167ENST00000345598ENST00000461918ENST00000525215ENST00000525604ENST00000526330ENST00000527702ENST00000528499ENST00000529235ENST00000529483ENST00000529701ENST00000530132ENST00000530493ENST00000532456ENST00000533195ENST00000533532ENST00000533616ENST00000533618ENST00000533713ENST00000533860ENST00000534001ENST00000534582ENST00000534761ENSG00000170325ENST00000304538ENST00000358825ENST00000360871ENST00000423662ENST00000526082ENST00000527581ENST00000528746ENST00000531431ENST00000533431ENSG00000233220ENST00000530583ENSG00000244451ENST00000487566ENSG00000255057ENST00000525666ENSG00000255262ENST00000526184
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000511_0001ENSDARG00000054864ENSDART00000077125CIL_000511_0002ENSG00000084234ENST00000263574ENST00000278756ENST00000338167ENST00000345598ENST00000528499ENST00000533616ENSG00000170325ENST00000304538ENST00000358825ENST00000360871ENST00000423662ENST00000526082ENST00000527581ENST00000528746ENST00000531431ENST00000533431ENSG00000233220ENST00000530583ENSG00000244451ENST00000487566ENSG00000255057ENST00000525666ENSG00000255262ENST00000526184
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054864 ENSDART00000077125 N/A N/A N/A 37.509±32.84 N/A N/A 30.452±10.89 15.780±0.48 1.599±0.00 N/A 22.219±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084234 ENST00000263574 42.843±0.00 24.498±0.00 18.409±0.00 46.842±12.35 31.280±14.83 18.507±0.00 8.737±0.00 35.773±4.19 19.078±1.85 36.982±3.51 6.882±0.00 22.793±1.05 36.440±0.00 N/A
ENST00000278756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 74.063±42.16 N/A N/A
ENST00000338167 N/A N/A 17.771±0.00 N/A 9.485±0.00 11.617±0.00 16.807±9.92 12.340±0.00 13.491±0.00 13.776±0.00 5.342±0.00 13.905±0.00 N/A N/A
ENST00000345598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 106.298±0.00 151.026±0.00 22.498±0.00
ENST00000461918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528499 N/A N/A N/A N/A 7.573±0.00 N/A 6.527±0.00 N/A N/A 16.207±0.00 2.796±0.00 33.570±0.00 N/A N/A
ENST00000529235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533616 59.449±0.00 N/A N/A 41.796±0.00 N/A N/A N/A N/A N/A N/A N/A 56.545±22.97 117.759±0.00 25.795±0.00
ENST00000533618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170325 ENST00000304538 0.795±0.00 0.660±0.00 0.143±0.00 0.358±0.07 N/A 0.417±0.06 N/A N/A 0.216±0.00 N/A 1.346±0.00 N/A 0.565±0.00 0.489±0.17
ENST00000358825 N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A
ENST00000360871 0.256±0.00 0.247±0.00 N/A 0.152±0.00 N/A 0.857±0.00 0.078±0.00 N/A 0.233±0.00 0.807±0.00 0.687±0.00 0.826±0.28 0.498±0.28 N/A
ENST00000423662 N/A N/A N/A N/A 0.549±0.32 N/A N/A N/A N/A 0.543±0.00 N/A 0.382±0.00 N/A N/A
ENST00000526082 N/A N/A N/A 0.410±0.00 0.323±0.00 N/A N/A 0.157±0.00 N/A N/A N/A 0.508±0.18 N/A N/A
ENST00000527581 N/A N/A N/A N/A N/A N/A N/A N/A 1.890±0.00 N/A N/A N/A N/A N/A
ENST00000528746 N/A 0.478±0.00 0.335±0.00 0.757±0.00 0.230±0.00 0.229±0.00 N/A 0.320±0.00 0.183±0.00 N/A N/A N/A N/A 0.734±0.00
ENST00000531431 N/A N/A 1.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533431 N/A N/A 0.268±0.00 0.610±0.00 N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A N/A
ENSG00000233220 ENST00000530583 0.115±0.00 0.244±0.00 0.049±0.00 0.249±0.00 0.294±0.08 0.098±0.06 0.171±0.00 0.335±0.15 0.067±0.00 0.208±0.08 0.022±0.00 0.108±0.10 N/A 1.146±0.00
ENSG00000244451 ENST00000487566 0.055±0.00 N/A N/A 0.118±0.00 2.224±0.00 N/A 0.102±0.00 0.331±0.00 N/A N/A N/A 0.385±0.21 N/A N/A
ENSG00000255057 ENST00000525666 0.054±0.00 0.280±0.00 N/A 0.044±0.00 0.153±0.00 0.008±0.00 0.017±0.00 0.054±0.00 0.008±0.00 0.020±0.00 0.057±0.00 0.063±0.01 N/A 0.306±0.07
ENSG00000255262 ENST00000526184 0.096±0.00 0.532±0.00 N/A 0.132±0.00 0.494±0.00 0.554±0.00 0.510±0.00 0.364±0.00 N/A 0.358±0.00 0.380±0.00 N/A 3.376±2.47 56.810±47.28

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