C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: armadillo repeat containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170632 ARMC10 9606 + 7:103074881-103099764 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306450 ARMC10-005 103074950-103098645 nonsense_mediated_decay
  ENST00000323716 ARMC10-001 103074881-103099764 protein_coding
  ENST00000323735 ARMC10-006 103074926-103098863 nonsense_mediated_decay
  ENST00000425331 ARMC10-201 103074881-103099749 protein_coding
  ENST00000428183 ARMC10-002 103074881-103099751 protein_coding
  ENST00000431642 ARMC10-008 103086639-103098683 protein_coding
  ENST00000434153 ARMC10-007 103075168-103098437 protein_coding
  ENST00000441711 ARMC10-003 103074881-103099758 protein_coding
  ENST00000454559 ARMC10-004 103074881-103099758 protein_coding
  ENST00000479145 ARMC10-009 103095727-103098914 retained_intron
  ENST00000541300 ARMC10-202 103074881-103099749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323716ENST00000323735ENST00000425331ENST00000428183ENST00000431642ENST00000441711ENST00000454559ENST00000479145ENST00000541300
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323716 2.886±0.00 N/A N/A N/A 2.128±0.00 2.759±0.00 N/A N/A N/A 2.608±0.00 N/A 3.413±1.91 2.525±1.78 3.554±0.00
ENST00000323735 N/A N/A N/A N/A N/A N/A N/A N/A 2.802±0.00 N/A N/A N/A N/A N/A
ENST00000425331 N/A N/A 2.032±0.00 N/A 0.881±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428183 N/A N/A N/A N/A N/A N/A N/A 1.965±0.00 N/A N/A N/A N/A 2.642±0.00 N/A
ENST00000431642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.172±0.00 N/A N/A N/A
ENST00000441711 2.854±0.00 5.393±0.00 N/A 5.393±2.32 5.607±0.00 4.466±0.07 1.876±1.12 5.107±3.26 3.192±0.76 2.546±1.45 1.098±0.00 5.630±1.84 4.526±1.30 5.274±0.00
ENST00000454559 N/A N/A N/A 0.997±0.00 2.395±0.00 2.764±0.00 N/A N/A N/A 0.779±0.00 N/A 2.891±1.16 N/A 1.591±0.00
ENST00000479145 N/A N/A N/A N/A 1.432±0.00 N/A 0.612±0.00 1.008±0.00 N/A 1.325±0.00 N/A 1.469±0.00 N/A N/A
ENST00000541300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.522±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0001 VISTA 7:102540897-103142421
CIL_0005CL CIL_0005CL_0001 CGP 7:102912991-103099764
CIL_0005CI CIL_0005CI_0001 CGP 7:103074881-103149560

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000221 IEA vacuolar proton-transporting V-type ATPase, V1 domain
GO:0005488 IEA binding
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062960 ARMCX3 armadillo repeat containing, X-linked 3 protein_coding Danio_rerio
ENSMUSG00000038525 Armc10 armadillo repeat containing 10 protein_coding Mus_musculus

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