C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323716 ARMC10-001 ENSG00000170632 9606 + 7:103074881-103099764 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungOvaryPlacentaTestisENST00000323716
Transcript ID Adipose Breast Colon Lung Ovary Placenta Testis
ENST00000323716 2.886±0.00 2.128±0.00 2.759±0.00 2.608±0.00 3.413±1.91 2.525±1.78 3.554±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0001 VISTA 7:102540897-103142421
CIL_0005CL CIL_0005CL_0001 CGP 7:102912991-103099764
CIL_0005CI CIL_0005CI_0001 CGP 7:103074881-103149560

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072896 Armc10-001 protein_coding Mus_musculus 0 691
ENSMUST00000148873 Armc10-002 protein_coding Mus_musculus 0 656
ENSMUST00000095495 Armc10-003 protein_coding Mus_musculus 0 464
ENSMUST00000139521 Armc10-005 retained_intron Mus_musculus 0 278

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