C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 32
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170832 USP32 9606 - 17:60179094-60422470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300896 USP32-001 60179094-60392134 protein_coding
  ENST00000393003 USP32-003 60249058-60391975 protein_coding
  ENST00000585720 USP32-011 60207729-60208813 retained_intron
  ENST00000586238 USP32-012 60183186-60185933 retained_intron
  ENST00000586881 USP32-006 60301599-60305228 processed_transcript
  ENST00000587651 USP32-009 60219571-60226149 retained_intron
  ENST00000588898 USP32-014 60294683-60422470 protein_coding
  ENST00000589335 USP32-007 60226183-60392230 protein_coding
  ENST00000589552 USP32-010 60219636-60226231 nonsense_mediated_decay
  ENST00000589761 USP32-005 60301450-60391928 retained_intron
  ENST00000590133 USP32-002 60209417-60392408 protein_coding
  ENST00000590297 USP32-015 60421208-60422337 protein_coding
  ENST00000591768 USP32-008 60213581-60226063 protein_coding
  ENST00000592339 USP32-004 60179105-60256700 protein_coding
  ENST00000593071 USP32-013 60179111-60181673 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300896ENST00000393003ENST00000590133ENST00000592339ENST00000593071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300896 2.518±0.00 1.719±0.00 2.095±0.00 3.104±1.57 1.720±0.60 1.357±0.78 2.373±0.00 1.276±0.00 1.099±0.57 3.795±0.29 3.045±0.00 2.613±0.80 2.275±1.60 25.071±9.29
ENST00000393003 N/A N/A N/A N/A N/A N/A 0.831±0.00 1.126±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590133 N/A N/A N/A 2.821±0.00 2.055±0.00 N/A N/A N/A 3.934±0.00 3.790±0.00 N/A 3.100±0.00 N/A N/A
ENST00000592339 N/A N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A 0.621±0.00 0.659±0.17 N/A
ENST00000593071 N/A 6.281±0.00 N/A N/A 4.050±0.00 5.661±0.00 N/A 4.537±1.16 2.525±0.00 N/A N/A N/A N/A 32.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006V1 CIL_0006V1_0001 CGP 17:60149936-60422470
CIL_000702 CIL_000702_0001 CGP 17:60179094-60431421

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IEA ubiquitin-specific protease activity
GO:0005509 IEA calcium ion binding
GO:0005794 IDA Golgi apparatus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016579 TAS protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061895 usp32 ubiquitin specific peptidase 32 protein_coding Danio_rerio
ENSMUSG00000000804 Usp32 ubiquitin specific peptidase 32 protein_coding Mus_musculus

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