C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590133 USP32-002 ENSG00000170832 9606 - 17:60209417-60392408 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverLungOvaryENST00000590133
Transcript ID Brain Breast Liver Lung Ovary
ENST00000590133 2.821±0.00 2.055±0.00 3.934±0.00 3.790±0.00 3.100±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006V1 CIL_0006V1_0001 CGP 17:60149936-60422470
CIL_000702 CIL_000702_0001 CGP 17:60179094-60431421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IEA ubiquitin-specific protease activity
GO:0005509 IEA calcium ion binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108075 Usp32-001 protein_coding Mus_musculus 0 3434
ENSMUST00000000821 Usp32-003 nonsense_mediated_decay Mus_musculus 0 634
ENSMUST00000174602 Usp32-005 protein_coding Mus_musculus 0 551
ENSMUST00000173271 Usp32-009 processed_transcript Mus_musculus 0 444
ENSMUST00000172950 Usp32-006 retained_intron Mus_musculus 0 252

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