C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytokine-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170891 CYTL1 9606 - 4:5014586-5019472 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307746 CYTL1-001 5014586-5019472 protein_coding
  ENST00000506508 CYTL1-003 5014827-5019437 protein_coding
  ENST00000509419 CYTL1-004 5015144-5019441 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000307746ENST00000506508ENST00000509419
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000307746 0.446±0.00 4.296±0.00 1.077±0.91 0.570±0.32 1.035±0.58 0.072±0.04 0.221±0.00 10.659±8.22 0.090±0.00 0.835±0.50 17.249±7.67 0.844±0.38
ENST00000506508 N/A 4.500±0.00 0.626±0.00 N/A 1.003±0.00 N/A N/A 8.118±0.00 0.279±0.00 0.286±0.00 N/A 0.889±0.00
ENST00000509419 N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A N/A 0.204±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096C CIL_00096C_0001 VISTA 4:4434704-5035550
CIL_000969 CIL_000969_0001 VISTA 4:4454510-5056279
CIL_0008DJ CIL_0008DJ_0001 VISTA 4:4518006-5118833
CIL_0008Y0 CIL_0008Y0_0001 VISTA 4:4554550-5158498
CIL_000967 CIL_000967_0001 VISTA 4:4564825-5165938

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002062 IEA chondrocyte differentiation
GO:0005102 TAS receptor binding
GO:0005615 TAS extracellular space
GO:0007165 TAS signal transduction
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048839 IEA inner ear development
GO:0050650 IEA chondroitin sulfate proteoglycan biosynthetic process
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:1990079 IEA cartilage homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089216 CABZ01024686.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000062329 Cytl1 cytokine-like 1 protein_coding Mus_musculus

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