C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nudix (nucleoside diphosphate linked moiety X)-type motif 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170917 NUDT6 9606 - 4:122888697-122922968 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304430 NUDT6-001 122892644-122922606 protein_coding
  ENST00000339154 NUDT6-002 122892644-122922968 protein_coding
  ENST00000502270 NUDT6-007 122892741-122913288 protein_coding
  ENST00000503370 NUDT6-005 122892646-122922574 nonsense_mediated_decay
  ENST00000510735 NUDT6-004 122892650-122922442 protein_coding
  ENST00000512116 NUDT6-006 122892575-122922582 nonsense_mediated_decay
  ENST00000513517 NUDT6-003 122897526-122922597 retained_intron
  ENST00000608639 NUDT6-008 122888697-122892688 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000304430ENST00000339154ENST00000510735ENST00000512116ENST00000513517
Transcript ID Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000304430 1.609±0.00 N/A 2.047±0.00 2.765±1.00 5.452±1.03 4.054±0.00 0.944±0.00 1.089±0.00 4.161±0.00 8.296±3.87
ENST00000339154 N/A N/A N/A N/A 3.255±0.00 N/A N/A N/A 1.533±0.00 N/A
ENST00000510735 N/A N/A N/A N/A N/A 3.144±0.00 N/A N/A N/A N/A
ENST00000512116 N/A 2.644±0.00 N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A
ENST00000513517 N/A N/A 0.414±0.00 N/A N/A N/A 0.164±0.00 0.054±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YN CIL_0006YN_0002 CGP 4:122826708-122922968
CIL_0006YK CIL_0006YK_0002 CGP 4:122888697-123319450

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0008083 TAS growth factor activity
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087321 nudt6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein_coding Danio_rerio
ENSMUSG00000050174 Nudt6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein_coding Mus_musculus

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