C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075031-ENSDARG00000087321 CGP 7955 14:563298-575589
GeneTranscriptPositionBiotype
ENSDARG00000075031 (fgf2)
fibroblast growth factor 2 		ENSDART00000112849 (fgf2-201) 563298-565810 protein_coding
ENSDARG00000087321 (nudt6)
nudix (nucleoside diphosphate linked moiety X)-type motif 6 		ENSDART00000124438 (nudt6-201) 567958-575589 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006YN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138685-ENSG00000170917 CGP 9606 4:122826708-122922968
GeneTranscriptPositionBiotype
ENSG00000138685 (FGF2)
fibroblast growth factor 2 (basic) 		ENST00000264498 (FGF2-001) 122826708-122898236 protein_coding
ENST00000608478 (FGF2-002) 122826831-122895464 protein_coding
ENST00000614010 (FGF2-201) 122826708-122898235 protein_coding
ENSG00000170917 (NUDT6)
nudix (nucleoside diphosphate linked moiety X)-type motif 6 		ENST00000304430 (NUDT6-001) 122892644-122922606 protein_coding
ENST00000339154 (NUDT6-002) 122892644-122922968 protein_coding
ENST00000502270 (NUDT6-007) 122892741-122913288 protein_coding
ENST00000503370 (NUDT6-005) 122892646-122922574 nonsense_mediated_decay
ENST00000510735 (NUDT6-004) 122892650-122922442 protein_coding
ENST00000512116 (NUDT6-006) 122892575-122922582 nonsense_mediated_decay
ENST00000513517 (NUDT6-003) 122897526-122922597 retained_intron
ENST00000608639 (NUDT6-008) 122888697-122892688 processed_transcript
ENSG00000240775 (RP11-170N16.2)
 ENST00000468797 (RP11-170N16.2-001) 122840343-122840690 processed_pseudogene
ENSG00000273007 (RP11-170N16.3)
 ENST00000609680 (RP11-170N16.3-001) 122881878-122884712 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YN_0001ENSDARG00000075031ENSDART00000112849ENSDARG00000087321ENSDART00000124438CIL_0006YN_0002ENSG00000138685ENST00000264498ENST00000608478ENST00000614010ENSG00000170917ENST00000304430ENST00000339154ENST00000502270ENST00000503370ENST00000510735ENST00000512116ENST00000513517ENST00000608639ENSG00000240775ENST00000468797ENSG00000273007ENST00000609680
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YN_0001ENSDARG00000075031ENSDART00000112849ENSDARG00000087321ENSDART00000124438CIL_0006YN_0002ENSG00000138685ENST00000264498ENST00000608478ENST00000614010ENSG00000170917ENST00000304430ENST00000339154ENST00000510735ENST00000512116ENST00000513517ENSG00000240775ENST00000468797ENSG00000273007ENST00000609680
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075031 ENSDART00000112849 N/A N/A N/A 58.217±40.46 N/A N/A 48.220±45.30 80.557±0.00 0.377±0.00 N/A 2.515±0.00 N/A N/A N/A
ENSDARG00000087321 ENSDART00000124438 N/A N/A N/A 2.268±1.31 N/A N/A 4.017±0.00 0.554±0.00 1.070±0.00 N/A 5.664±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138685 ENST00000264498 2.696±0.00 0.844±0.00 0.595±0.00 1.801±0.37 2.849±1.07 1.743±0.77 0.394±0.15 0.649±0.29 1.224±1.10 1.551±0.51 0.174±0.10 0.791±0.52 0.576±0.08 0.613±0.00
ENST00000608478 N/A N/A N/A N/A N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614010 2.763±0.00 1.739±0.00 0.600±0.00 3.249±1.80 3.728±1.94 2.400±1.43 0.411±0.15 0.655±0.29 1.268±1.14 3.395±2.35 0.178±0.10 1.099±0.89 0.584±0.08 1.414±0.00
ENSG00000170917 ENST00000304430 N/A N/A 1.609±0.00 N/A N/A 2.047±0.00 2.765±1.00 5.452±1.03 4.054±0.00 N/A 0.944±0.00 1.089±0.00 4.161±0.00 8.296±3.87
ENST00000339154 N/A N/A N/A N/A N/A N/A N/A 3.255±0.00 N/A N/A N/A N/A 1.533±0.00 N/A
ENST00000502270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510735 N/A N/A N/A N/A N/A N/A N/A N/A 3.144±0.00 N/A N/A N/A N/A N/A
ENST00000512116 N/A N/A N/A 2.644±0.00 N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A
ENST00000513517 N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A N/A 0.164±0.00 0.054±0.00 N/A N/A
ENST00000608639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240775 ENST00000468797 N/A N/A 0.619±0.00 N/A 1.117±1.07 N/A 0.083±0.00 N/A 2.805±0.00 0.509±0.00 N/A N/A N/A N/A
ENSG00000273007 ENST00000609680 0.074±0.00 0.177±0.00 0.032±0.00 0.177±0.09 0.447±0.20 0.207±0.07 0.111±0.00 0.182±0.01 0.092±0.02 0.194±0.04 0.064±0.00 0.184±0.12 0.040±0.02 0.188±0.00

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