C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087321-ENSDARG00000087021 CGP 7955 14:567958-591938
GeneTranscriptPositionBiotype
ENSDARG00000087021 (CABZ01085878.1)
Uncharacterized protein 		ENSDART00000128072 (CABZ01085878.1-201) 580059-591938 protein_coding
ENSDARG00000087321 (nudt6)
nudix (nucleoside diphosphate linked moiety X)-type motif 6 		ENSDART00000124438 (nudt6-201) 567958-575589 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006YK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170917-ENSG00000145375 CGP 9606 4:122888697-123319450
GeneTranscriptPositionBiotype
ENSG00000138685 (FGF2)
fibroblast growth factor 2 (basic) 		ENST00000264498 (FGF2-001) 122826708-122898236 protein_coding
ENST00000608478 (FGF2-002) 122826831-122895464 protein_coding
ENST00000614010 (FGF2-201) 122826708-122898235 protein_coding
ENSG00000145375 (SPATA5)
spermatogenesis associated 5 		ENST00000274008 (SPATA5-001) 122923074-123319450 protein_coding
ENST00000422835 (SPATA5-002) 122923101-123102293 processed_transcript
ENSG00000170917 (NUDT6)
nudix (nucleoside diphosphate linked moiety X)-type motif 6 		ENST00000304430 (NUDT6-001) 122892644-122922606 protein_coding
ENST00000339154 (NUDT6-002) 122892644-122922968 protein_coding
ENST00000502270 (NUDT6-007) 122892741-122913288 protein_coding
ENST00000503370 (NUDT6-005) 122892646-122922574 nonsense_mediated_decay
ENST00000510735 (NUDT6-004) 122892650-122922442 protein_coding
ENST00000512116 (NUDT6-006) 122892575-122922582 nonsense_mediated_decay
ENST00000513517 (NUDT6-003) 122897526-122922597 retained_intron
ENST00000608639 (NUDT6-008) 122888697-122892688 processed_transcript
ENSG00000216154 (AC109357.1)
 ENST00000401335 (AC109357.1-201) 123007572-123007663 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006YK_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050174-ENSMUSG00000027722 CGP 10090 3:37404910-37579096
GeneTranscriptPositionBiotype
ENSMUSG00000027722 (Spata5)
spermatogenesis associated 5 		ENSMUST00000029277 (Spata5-002) 37420298-37579096 protein_coding
ENSMUST00000108112 (Spata5-001) 37419896-37579096 protein_coding
ENSMUST00000124347 (Spata5-005) 37432058-37439152 processed_transcript
ENSMUST00000130674 (Spata5-007) 37451721-37528356 processed_transcript
ENSMUST00000132958 (Spata5-008) 37528242-37579096 processed_transcript
ENSMUST00000138225 (Spata5-004) 37420864-37426153 processed_transcript
ENSMUST00000142199 (Spata5-006) 37436567-37439272 retained_intron
ENSMUST00000147687 (Spata5-003) 37420373-37425390 processed_transcript
ENSMUSG00000037225 (Fgf2)
fibroblast growth factor 2 		ENSMUST00000038885 (Fgf2-007) 37348653-37404889 protein_coding
ENSMUST00000091203 (Fgf2-005) 37380755-37404797 protein_coding
ENSMUST00000108120 (Fgf2-004) 37380755-37404797 protein_coding
ENSMUST00000138563 (Fgf2-001) 37348346-37405377 protein_coding
ENSMUST00000138710 (Fgf2-006) 37312519-37404866 processed_transcript
ENSMUST00000145228 (Fgf2-003) 37380659-37404797 processed_transcript
ENSMUST00000150021 (Fgf2-002) 37366990-37404797 processed_transcript
ENSMUSG00000050174 (Nudt6)
nudix (nucleoside diphosphate linked moiety X)-type motif 6 		ENSMUST00000052645 (Nudt6-001) 37404910-37419596 protein_coding
ENSMUST00000099130 (Nudt6-201) 37404984-37419590 protein_coding
ENSMUST00000108117 (Nudt6-004) 37404910-37419580 protein_coding
ENSMUST00000108118 (Nudt6-002) 37404910-37419580 protein_coding
ENSMUST00000133894 (Nudt6-008) 37405079-37410675 processed_transcript
ENSMUST00000138949 (Nudt6-005) 37412371-37419566 protein_coding
ENSMUST00000141438 (Nudt6-007) 37404982-37420211 processed_transcript
ENSMUST00000146324 (Nudt6-006) 37404910-37420186 processed_transcript
ENSMUST00000149449 (Nudt6-003) 37405356-37419573 protein_coding
ENSMUSG00000080723 (Gm12564)
predicted gene 12564 		ENSMUST00000119860 (Gm12564-001) 37556183-37556503 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YK_0001ENSDARG00000087021ENSDART00000128072ENSDARG00000087321ENSDART00000124438CIL_0006YK_0002ENSG00000138685ENST00000264498ENST00000608478ENST00000614010ENSG00000145375ENST00000274008ENST00000422835ENSG00000170917ENST00000304430ENST00000339154ENST00000502270ENST00000503370ENST00000510735ENST00000512116ENST00000513517ENST00000608639ENSG00000216154ENST00000401335CIL_0006YK_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YK_0001ENSDARG00000087021ENSDART00000128072ENSDARG00000087321ENSDART00000124438CIL_0006YK_0002ENSG00000138685ENST00000264498ENST00000608478ENST00000614010ENSG00000145375ENST00000274008ENST00000422835ENSG00000170917ENST00000304430ENST00000339154ENST00000510735ENST00000512116ENST00000513517ENSG00000216154ENST00000401335CIL_0006YK_0003ENSMUSG00000027722ENSMUST00000029277ENSMUST00000108112ENSMUST00000130674ENSMUSG00000037225ENSMUST00000038885ENSMUSG00000050174ENSMUST00000052645ENSMUST00000099130ENSMUST00000149449ENSMUSG00000080723ENSMUST00000119860
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000087021 ENSDART00000128072 N/A N/A N/A 1.090±0.00 N/A N/A 0.445±0.00 N/A 0.876±0.00 N/A 1.154±0.00 N/A N/A N/A
ENSDARG00000087321 ENSDART00000124438 N/A N/A N/A 2.268±1.31 N/A N/A 4.017±0.00 0.554±0.00 1.070±0.00 N/A 5.664±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138685 ENST00000264498 2.696±0.00 0.844±0.00 0.595±0.00 1.801±0.37 2.849±1.07 1.743±0.77 0.394±0.15 0.649±0.29 1.224±1.10 1.551±0.51 0.174±0.10 0.791±0.52 0.576±0.08 0.613±0.00
ENST00000608478 N/A N/A N/A N/A N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614010 2.763±0.00 1.739±0.00 0.600±0.00 3.249±1.80 3.728±1.94 2.400±1.43 0.411±0.15 0.655±0.29 1.268±1.14 3.395±2.35 0.178±0.10 1.099±0.89 0.584±0.08 1.414±0.00
ENSG00000145375 ENST00000274008 1.419±0.00 0.560±0.00 0.745±0.00 0.428±0.03 1.221±0.00 1.049±0.03 0.606±0.00 0.627±0.38 0.713±0.49 0.773±0.26 0.379±0.28 0.749±0.13 0.622±0.39 2.278±0.13
ENST00000422835 N/A N/A N/A 1.208±0.00 N/A 1.466±0.00 0.472±0.00 2.468±0.00 2.579±0.00 1.502±0.00 1.587±0.00 2.345±1.38 N/A N/A
ENSG00000170917 ENST00000304430 N/A N/A 1.609±0.00 N/A N/A 2.047±0.00 2.765±1.00 5.452±1.03 4.054±0.00 N/A 0.944±0.00 1.089±0.00 4.161±0.00 8.296±3.87
ENST00000339154 N/A N/A N/A N/A N/A N/A N/A 3.255±0.00 N/A N/A N/A N/A 1.533±0.00 N/A
ENST00000502270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510735 N/A N/A N/A N/A N/A N/A N/A N/A 3.144±0.00 N/A N/A N/A N/A N/A
ENST00000512116 N/A N/A N/A 2.644±0.00 N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A
ENST00000513517 N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A N/A 0.164±0.00 0.054±0.00 N/A N/A
ENST00000608639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216154 ENST00000401335 N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027722 ENSMUST00000029277 N/A N/A N/A 3.213±1.75 N/A N/A N/A N/A 1.804±0.73 N/A 1.522±0.22 4.796±0.02 7.018±5.09 19.664±15.76
ENSMUST00000108112 1.934±0.00 N/A N/A 1.569±0.14 N/A N/A N/A 1.192±0.00 1.483±0.63 N/A N/A 1.760±0.16 1.737±0.00 4.357±1.09
ENSMUST00000124347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.305±10.19 N/A
ENSMUST00000132958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037225 ENSMUST00000038885 N/A 5.548±0.00 N/A N/A 11.210±1.70 2.244±0.40 N/A N/A N/A 6.387±1.01 N/A 5.571±1.49 N/A N/A
ENSMUST00000091203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050174 ENSMUST00000052645 5.229±0.00 7.350±1.69 N/A N/A 5.743±2.42 3.640±1.27 8.262±1.13 6.307±2.61 4.755±2.11 3.576±0.00 8.626±0.75 4.262±1.61 N/A N/A
ENSMUST00000099130 6.986±1.70 13.056±3.89 N/A N/A 10.901±1.43 4.876±1.61 7.413±1.00 8.543±2.50 6.258±2.35 4.610±1.42 5.635±0.98 7.099±1.59 N/A N/A
ENSMUST00000108117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149449 N/A 12.349±4.42 N/A N/A N/A 3.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080723 ENSMUST00000119860 0.489±0.25 0.723±0.04 0.051±0.00 N/A 0.773±0.43 0.714±0.01 N/A 0.831±0.36 0.371±0.24 0.412±0.08 N/A 0.971±0.93 0.247±0.00 0.300±0.09

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