C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuronal growth regulator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172260 NEGR1 9606 - 1:71395940-72282734 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306821 NEGR1-002 71402944-72100930 protein_coding
  ENST00000357731 NEGR1-001 71395940-72282734 protein_coding
  ENST00000434200 NEGR1-201 71402942-71935322 protein_coding
  ENST00000467479 NEGR1-004 71697946-72100917 processed_transcript
  ENST00000474357 NEGR1-005 71407492-71439838 processed_transcript
  ENST00000478526 NEGR1-003 71697936-71703405 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306821ENST00000357731ENST00000434200ENST00000467479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306821 N/A N/A 0.931±0.00 N/A N/A 2.735±0.00 N/A N/A N/A N/A N/A 1.060±0.00 N/A N/A
ENST00000357731 0.735±0.00 0.504±0.00 0.161±0.00 5.204±1.30 0.224±0.00 N/A 0.202±0.00 0.399±0.00 0.714±0.66 0.297±0.04 0.127±0.09 0.163±0.04 0.062±0.00 0.530±0.20
ENST00000434200 7.375±0.00 0.514±0.00 N/A 12.831±1.48 3.097±0.35 25.271±0.00 2.181±0.68 1.135±1.11 11.980±0.00 2.451±0.67 0.806±0.56 1.140±0.85 0.462±0.26 4.922±3.56
ENST00000467479 13.846±0.00 3.489±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.073±0.00 0.561±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007626 IEA locomotory behavior
GO:0007631 IEA feeding behavior
GO:0010976 IEA positive regulation of neuron projection development
GO:0016337 IEA single organismal cell-cell adhesion
GO:0031225 IEA anchored component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021607 negr1 neuronal growth regulator 1 protein_coding Danio_rerio
ENSMUSG00000040037 Negr1 neuronal growth regulator 1 protein_coding Mus_musculus

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