C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal growth regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357731 NEGR1-001 ENSG00000172260 9606 - 1:71395940-72282734 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357731
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357731 0.735±0.00 0.504±0.00 0.161±0.00 5.204±1.30 0.224±0.00 0.202±0.00 0.399±0.00 0.714±0.66 0.297±0.04 0.127±0.09 0.163±0.04 0.062±0.00 0.530±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007626 IEA locomotory behavior
GO:0007631 IEA feeding behavior
GO:0010976 IEA positive regulation of neuron projection development
GO:0016337 IEA single organismal cell-cell adhesion
GO:0031225 IEA anchored component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074015 Negr1-001 protein_coding Mus_musculus 0 1980
ENSMUST00000106065 Negr1-003 protein_coding Mus_musculus 0 1212
ENSMUST00000041425 Negr1-002 protein_coding Mus_musculus 0 1212
ENSMUST00000175773 Negr1-004 protein_coding Mus_musculus 1e-36 161
ENSDART00000028895 negr1-001 protein_coding Danio_rerio 8e-34 152
ENSMUST00000039956 Slc41a2-001 protein_coding Mus_musculus 0.000001 62

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