C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuronal growth regulator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040037 Negr1 10090 + 3:156561794-157316445 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041425 Negr1-002 156561959-157171829 protein_coding
  ENSMUST00000074015 Negr1-001 156561794-157316445 protein_coding
  ENSMUST00000106065 Negr1-003 156561969-157199228 protein_coding
  ENSMUST00000175773 Negr1-004 156562150-157016244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041425ENSMUST00000074015ENSMUST00000106065ENSMUST00000175773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041425 N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A
ENSMUST00000074015 4.154±0.11 1.240±0.69 1.868±0.12 19.180±3.99 3.097±0.69 0.748±0.18 0.469±0.11 1.107±0.15 0.057±0.05 0.904±0.05 0.074±0.04 0.989±0.36 0.179±0.11 0.141±0.04
ENSMUST00000106065 1.945±0.25 0.834±0.00 0.671±0.00 N/A 1.255±0.10 0.563±0.32 0.267±0.04 0.357±0.05 0.013±0.00 0.676±0.19 0.035±0.01 0.767±0.27 0.017±0.00 0.093±0.05
ENSMUST00000175773 N/A 1.532±0.71 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WX CIL_0000WX_0002 CGP 3:156561794-157548390

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IDA plasma membrane
GO:0007626 IMP locomotory behavior
GO:0007631 IMP feeding behavior
GO:0010976 IDA positive regulation of neuron projection development
GO:0016337 IDA single organismal cell-cell adhesion
GO:0031225 IEA anchored component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021607 negr1 neuronal growth regulator 1 protein_coding Danio_rerio
ENSG00000172260 NEGR1 neuronal growth regulator 1 protein_coding Homo_sapiens

Loading