C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003LC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172482-ENSG00000172478 CGP 9606 2:240868479-240896889
GeneTranscriptPositionBiotype
ENSG00000172478 (C2orf54)
chromosome 2 open reading frame 54 		ENST00000307486 (C2orf54-003) 240886049-240892038 protein_coding
ENST00000388934 (C2orf54-001) 240886662-240896156 protein_coding
ENST00000402775 (C2orf54-004) 240886048-240892035 protein_coding
ENST00000414499 (C2orf54-005) 240895600-240896889 protein_coding
ENST00000454476 (C2orf54-006) 240895643-240896852 protein_coding
ENSG00000172482 (AGXT)
alanine-glyoxylate aminotransferase 		ENST00000307503 (AGXT-001) 240868479-240879120 protein_coding
ENST00000470255 (AGXT-002) 240876913-240880502 retained_intron
ENST00000472436 (AGXT-003) 240868846-240873468 retained_intron
ENST00000476698 (AGXT-004) 240871189-240876013 retained_intron
CIL_0003LC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026272-ENSMUSG00000034159 CGP 10090 1:93135240-93160948
GeneTranscriptPositionBiotype
ENSMUSG00000026272 (Agxt)
alanine-glyoxylate aminotransferase 		ENSMUST00000027491 (Agxt-001) 93135240-93145421 protein_coding
ENSMUST00000190603 (Agxt-002) 93139879-93145417 processed_transcript
ENSMUST00000191039 (Agxt-003) 93135568-93138002 retained_intron
ENSMUSG00000034159 (2310007B03Rik)
RIKEN cDNA 2310007B03 gene 		ENSMUST00000043718 (2310007B03Rik-001) 93151349-93160948 protein_coding
ENSMUST00000143419 (2310007B03Rik-002) 93151583-93160870 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LC_0001ENSG00000172478ENST00000307486ENST00000388934ENST00000402775ENST00000414499ENST00000454476ENSG00000172482ENST00000307503ENST00000470255ENST00000472436ENST00000476698CIL_0003LC_0002ENSMUSG00000026272ENSMUST00000027491ENSMUST00000190603ENSMUST00000191039ENSMUSG00000034159ENSMUST00000043718ENSMUST00000143419
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LC_0001ENSG00000172478ENST00000307486ENST00000388934ENST00000402775ENST00000414499ENSG00000172482ENST00000307503ENST00000470255ENST00000472436ENST00000476698CIL_0003LC_0002ENSMUSG00000026272ENSMUST00000027491ENSMUST00000190603ENSMUST00000191039ENSMUSG00000034159ENSMUST00000043718ENSMUST00000143419
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172478 ENST00000307486 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000388934 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A N/A 2.624±3.29 0.530±0.17 N/A
ENST00000402775 N/A 0.089±0.00 0.562±0.00 0.046±0.02 0.108±0.00 0.064±0.00 0.010±0.00 1.089±0.89 0.140±0.00 0.483±0.03 N/A 1.101±0.00 0.361±0.25 0.105±0.00
ENST00000414499 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.755±0.00 N/A N/A N/A N/A
ENST00000454476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172482 ENST00000307503 0.131±0.00 N/A 2.270±0.00 0.056±0.00 0.371±0.03 N/A N/A 38.344±37.90 414.150±414.11 N/A 0.490±0.00 N/A 1.401±0.81 N/A
ENST00000470255 0.017±0.00 0.195±0.00 N/A 0.230±0.00 0.234±0.00 0.103±0.00 0.052±0.00 0.116±0.00 N/A 0.085±0.00 0.014±0.00 0.054±0.03 N/A 0.126±0.02
ENST00000472436 N/A N/A N/A 0.147±0.00 0.177±0.00 N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A
ENST00000476698 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00 0.269±0.00 0.755±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026272 ENSMUST00000027491 0.027±0.01 0.110±0.05 N/A 0.005±0.00 0.243±0.04 0.032±0.00 0.046±0.03 0.030±0.01 118.100±109.22 0.056±0.02 N/A 0.277±0.21 N/A 0.037±0.00
ENSMUST00000190603 0.017±0.00 0.122±0.02 N/A 0.009±0.00 N/A N/A 0.055±0.00 0.033±0.00 N/A 0.097±0.00 N/A 0.208±0.07 N/A 0.031±0.00
ENSMUST00000191039 N/A 0.121±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00 0.200±0.00 N/A
ENSMUSG00000034159 ENSMUST00000043718 1.919±0.00 N/A 0.021±0.02 0.088±0.00 0.269±0.09 2.169±1.14 N/A 1.578±0.33 0.176±0.13 7.319±1.61 0.083±0.00 0.723±0.40 0.159±0.17 N/A
ENSMUST00000143419 0.638±0.65 N/A 0.019±0.00 0.163±0.04 0.085±0.02 3.994±0.90 0.314±0.01 2.116±0.83 0.157±0.11 25.674±3.30 0.022±0.01 1.200±0.65 0.042±0.02 0.035±0.02

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