C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: schlafen family member 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172716 SLFN11 9606 - 17:35350305-35373701 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308377 SLFN11-002 35350305-35373607 protein_coding
  ENST00000394566 SLFN11-001 35350305-35373620 protein_coding
  ENST00000427966 SLFN11-005 35363537-35373620 protein_coding
  ENST00000430814 SLFN11-004 35363536-35373620 protein_coding
  ENST00000441608 SLFN11-003 35363473-35373695 protein_coding
  ENST00000498396 SLFN11-006 35367266-35373620 retained_intron
  ENST00000586099 SLFN11-013 35360019-35362992 retained_intron
  ENST00000588579 SLFN11-011 35363568-35373620 protein_coding
  ENST00000589562 SLFN11-012 35363622-35367294 retained_intron
  ENST00000589811 SLFN11-010 35363507-35373620 protein_coding
  ENST00000591682 SLFN11-009 35363439-35373622 protein_coding
  ENST00000592108 SLFN11-007 35351899-35353131 protein_coding
  ENST00000592122 SLFN11-008 35363662-35373701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308377ENST00000394566ENST00000589562ENST00000592108
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308377 5.290±0.00 1.975±0.00 N/A 0.386±0.09 4.734±0.54 4.761±0.00 2.398±0.00 1.548±1.38 0.424±0.00 5.947±3.81 1.000±0.00 3.431±2.68 0.664±0.14 2.127±1.67
ENST00000394566 2.409±0.00 3.414±0.00 N/A 0.462±0.00 N/A 1.679±0.00 1.118±0.15 1.141±0.00 3.259±0.00 5.188±0.51 0.807±0.23 3.490±3.32 0.824±0.33 0.508±0.25
ENST00000589562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.168±0.00
ENST00000592108 N/A N/A 0.953±0.00 N/A N/A N/A N/A 1.384±0.00 N/A N/A N/A 1.256±0.00 1.323±0.18 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K4 CIL_0003K4_0001 CGP 17:35243036-35373701
CIL_0003RF CIL_0003RF_0002 CGP 17:35350305-35433283

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IEA:IDA tRNA binding
GO:0005524 IEA ATP binding
GO:0005634 IEA:IDA nucleus
GO:0005737 IDA cytoplasm
GO:0051607 IEA:IMP defense response to virus
GO:2000134 IEA:IMP negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000035208 Slfn8 schlafen 8 protein_coding Mus_musculus
ENSMUSG00000069793 Slfn9 schlafen 9 protein_coding Mus_musculus

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