C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: schlafen family member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308377 SLFN11-002 ENSG00000172716 9606 - 17:35350305-35373607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308377
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308377 5.290±0.00 1.975±0.00 0.386±0.09 4.734±0.54 4.761±0.00 2.398±0.00 1.548±1.38 0.424±0.00 5.947±3.81 1.000±0.00 3.431±2.68 0.664±0.14 2.127±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K4 CIL_0003K4_0001 CGP 17:35243036-35373701
CIL_0003RF CIL_0003RF_0002 CGP 17:35350305-35433283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA:IDA tRNA binding
GO:0005524 IEA ATP binding
GO:0005634 IEA:IDA nucleus
GO:0005737 IDA cytoplasm
GO:0051607 IEA:IMP defense response to virus
GO:2000134 IEA:IMP negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152760 Slfn10-ps-001 transcribed_unprocessed_pseudogene Mus_musculus 0 909
ENSMUST00000100716 Slfn10-ps-002 processed_transcript Mus_musculus 0 909
ENSMUST00000108152 Slfn8-201 protein_coding Mus_musculus 4.99983e-42 178
ENSMUST00000130822 Slfn8-002 protein_coding Mus_musculus 4.99983e-42 178
ENSMUST00000092838 Slfn8-003 protein_coding Mus_musculus 4.99983e-42 178
ENSMUST00000038141 Slfn8-001 protein_coding Mus_musculus 4.99983e-42 178
ENSMUST00000138797 Slfn9-003 protein_coding Mus_musculus 1e-33 150
ENSMUST00000092840 Slfn9-002 protein_coding Mus_musculus 1e-33 150
ENSMUST00000038211 Slfn9-001 protein_coding Mus_musculus 1e-33 150

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