C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COBW domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172785 CBWD1 9606 - 9:121038-179147 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314367 CBWD1-009 121060-179047 protein_coding
  ENST00000356521 CBWD1-008 121038-179058 protein_coding
  ENST00000377400 CBWD1-019 121041-179147 protein_coding
  ENST00000377447 CBWD1-017 152914-179025 protein_coding
  ENST00000382389 CBWD1-015 171953-179023 protein_coding
  ENST00000382393 CBWD1-010 171953-179045 protein_coding
  ENST00000382447 CBWD1-012 121409-179021 protein_coding
  ENST00000431099 CBWD1-016 160088-179018 processed_transcript
  ENST00000462513 CBWD1-006 121503-146154 processed_transcript
  ENST00000464198 CBWD1-005 121411-123747 retained_intron
  ENST00000465014 CBWD1-024 121224-179042 nonsense_mediated_decay
  ENST00000475411 CBWD1-002 121089-149446 retained_intron
  ENST00000475990 CBWD1-004 121052-146140 protein_coding
  ENST00000483817 CBWD1-018 171596-173371 retained_intron
  ENST00000487575 CBWD1-014 121410-166599 processed_transcript
  ENST00000489272 CBWD1-011 151745-161647 nonsense_mediated_decay
  ENST00000495302 CBWD1-003 121418-167605 processed_transcript
  ENST00000498044 CBWD1-013 146114-172172 processed_transcript
  ENST00000611457 CBWD1-029 121091-148625 retained_intron
  ENST00000612045 CBWD1-025 121089-179012 nonsense_mediated_decay
  ENST00000613355 CBWD1-022 122843-179016 nonsense_mediated_decay
  ENST00000613508 CBWD1-027 121407-179008 protein_coding
  ENST00000613988 CBWD1-020 151577-179088 retained_intron
  ENST00000616803 CBWD1-030 152034-173325 nonsense_mediated_decay
  ENST00000616944 CBWD1-023 122691-179052 nonsense_mediated_decay
  ENST00000618061 CBWD1-028 150132-164039 nonsense_mediated_decay
  ENST00000618361 CBWD1-032 147950-164039 nonsense_mediated_decay
  ENST00000619157 CBWD1-026 121058-164009 nonsense_mediated_decay
  ENST00000620292 CBWD1-031 154732-172179 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356521ENST00000377400ENST00000377447ENST00000382393ENST00000382447ENST00000431099ENST00000464198ENST00000465014ENST00000475411ENST00000613508ENST00000616803ENST00000616944
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356521 N/A N/A N/A N/A 1.695±0.00 1.945±0.00 N/A 1.074±0.00 N/A N/A N/A N/A 0.664±0.17 N/A
ENST00000377400 N/A N/A N/A 0.971±0.00 N/A N/A N/A N/A N/A 1.140±0.00 N/A N/A N/A N/A
ENST00000377447 N/A N/A 0.879±0.00 0.906±0.00 2.306±0.00 2.274±0.00 N/A 0.803±0.00 1.483±0.00 1.664±0.00 N/A N/A N/A N/A
ENST00000382393 N/A N/A N/A 1.290±0.00 N/A N/A N/A 1.184±0.00 1.625±0.00 N/A N/A N/A N/A N/A
ENST00000382447 1.338±0.00 N/A 2.333±0.00 1.641±0.00 2.236±0.00 1.538±0.00 1.427±0.89 3.821±0.00 1.379±0.45 1.097±0.00 0.131±0.00 3.673±0.00 3.910±0.02 0.978±0.00
ENST00000431099 N/A N/A N/A N/A N/A N/A N/A 3.546±0.00 N/A N/A N/A 6.784±0.00 28.640±0.00 11.613±0.00
ENST00000464198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A N/A N/A
ENST00000465014 N/A N/A 0.831±0.00 N/A N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A
ENST00000475411 0.896±0.00 3.022±0.00 N/A 1.450±0.49 2.018±0.86 0.692±0.49 0.551±0.31 0.941±0.19 0.642±0.41 0.779±0.50 0.044±0.00 2.143±1.21 0.181±0.00 1.615±1.03
ENST00000613508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A
ENST00000616803 N/A N/A N/A N/A N/A N/A 1.573±0.00 N/A N/A 1.714±0.00 N/A N/A N/A 2.008±0.00
ENST00000616944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AF CIL_0009AF_0001 VISTA 9:-140343-460780
CIL_0000VT CIL_0000VT_0001 CGP 9:116231-179147

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004318 cbwd COBW domain containing protein_coding Danio_rerio
ENSMUSG00000024878 Cbwd1 COBW domain containing 1 protein_coding Mus_musculus

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