C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NAD synthetase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172890 NADSYN1 9606 + 11:71453109-71524107 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319023 NADSYN1-001 71453109-71501816 protein_coding
  ENST00000524450 NADSYN1-024 71482723-71484392 retained_intron
  ENST00000524949 NADSYN1-011 71453231-71464508 retained_intron
  ENST00000525200 NADSYN1-003 71455125-71501541 nonsense_mediated_decay
  ENST00000525245 NADSYN1-022 71453356-71460947 processed_transcript
  ENST00000525593 NADSYN1-019 71497505-71505872 nonsense_mediated_decay
  ENST00000526039 NADSYN1-016 71480149-71490876 processed_transcript
  ENST00000527227 NADSYN1-017 71480152-71481430 retained_intron
  ENST00000527538 NADSYN1-013 71453241-71460075 processed_transcript
  ENST00000527852 NADSYN1-023 71477347-71482986 nonsense_mediated_decay
  ENST00000527963 NADSYN1-025 71498402-71524107 nonsense_mediated_decay
  ENST00000528211 NADSYN1-021 71503545-71504478 processed_transcript
  ENST00000528509 NADSYN1-002 71453217-71477225 nonsense_mediated_decay
  ENST00000529120 NADSYN1-010 71453211-71473294 nonsense_mediated_decay
  ENST00000529840 NADSYN1-015 71478395-71485648 protein_coding
  ENST00000530055 NADSYN1-004 71479294-71501539 protein_coding
  ENST00000530534 NADSYN1-014 71473663-71479082 retained_intron
  ENST00000530831 NADSYN1-006 71496435-71500035 retained_intron
  ENST00000531236 NADSYN1-005 71480811-71498728 retained_intron
  ENST00000533612 NADSYN1-009 71453209-71455460 retained_intron
  ENST00000533769 NADSYN1-012 71453231-71472491 processed_transcript
  ENST00000534634 NADSYN1-008 71453109-71459056 retained_intron
  ENST00000624637 NADSYN1-007 71503864-71505874 TEC

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319023ENST00000524450ENST00000525200ENST00000525593ENST00000527852ENST00000527963ENST00000528509ENST00000529840ENST00000530055ENST00000533769ENST00000624637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319023 9.779±0.00 11.154±0.00 N/A 3.084±1.67 3.873±2.44 3.007±0.00 1.490±1.25 8.837±0.00 6.175±0.00 4.534±3.03 1.114±0.91 6.799±4.08 11.422±3.85 8.274±0.00
ENST00000524450 N/A N/A N/A N/A N/A N/A 1.632±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000525200 N/A N/A 0.849±0.00 N/A 1.249±0.00 1.342±0.00 N/A 1.517±1.17 N/A N/A 0.550±0.00 3.579±0.00 N/A N/A
ENST00000525593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.278±0.00 11.601±0.00 N/A
ENST00000527852 N/A N/A N/A N/A N/A 9.719±0.00 N/A 4.203±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.099±0.00 N/A N/A N/A
ENST00000528509 N/A N/A 0.653±0.00 N/A 1.831±0.00 4.006±0.00 0.175±0.00 N/A 1.605±0.00 1.363±0.00 N/A 0.883±0.00 N/A N/A
ENST00000529840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.217±0.67 N/A N/A N/A
ENST00000530055 N/A 5.654±0.00 0.697±0.00 N/A 3.262±1.13 2.872±1.49 1.137±0.00 2.428±1.26 1.777±0.45 3.509±0.28 0.517±0.00 4.555±2.39 N/A 10.782±0.00
ENST00000533769 N/A N/A N/A N/A N/A N/A N/A 3.084±0.00 N/A N/A N/A 4.211±0.00 N/A N/A
ENST00000624637 N/A N/A N/A 1.898±0.00 N/A 0.955±0.00 N/A N/A N/A N/A N/A 1.665±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SL CIL_0001SL_0002 CGP 11:71428193-71524107

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003952 TAS:IEA NAD+ synthase (glutamine-hydrolyzing) activity
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006807 IEA nitrogen compound metabolic process
GO:0009435 IEA NAD biosynthetic process
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019674 TAS NAD metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009903 nadsyn1 NAD synthetase 1 protein_coding Danio_rerio
ENSDARG00000087722 CABZ01069576.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000031090 Nadsyn1 NAD synthetase 1 protein_coding Mus_musculus

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