C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NAD synthetase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528509 NADSYN1-002 ENSG00000172890 9606 + 11:71453217-71477225 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungOvaryENST00000528509
Transcript ID Bladder Breast Colon Heart Liver Lung Ovary
ENST00000528509 0.653±0.00 1.831±0.00 4.006±0.00 0.175±0.00 1.605±0.00 1.363±0.00 0.883±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SL CIL_0001SL_0002 CGP 11:71428193-71524107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0006807 IEA nitrogen compound metabolic process
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132520 Nadsyn1-007 nonsense_mediated_decay Mus_musculus 0 865
ENSMUST00000033415 Nadsyn1-001 protein_coding Mus_musculus 0 865
ENSMUST00000143210 Nadsyn1-006 retained_intron Mus_musculus 0 544
ENSMUST00000142749 Nadsyn1-003 retained_intron Mus_musculus 0 497
ENSMUST00000156638 Nadsyn1-002 nonsense_mediated_decay Mus_musculus 0 411
ENSMUST00000143366 Nadsyn1-004 nonsense_mediated_decay Mus_musculus 0 237
ENSMUST00000156779 Nadsyn1-005 protein_coding Mus_musculus 1.4013e-45 189

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