C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001SL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015564-ENSDARG00000009903 CGP 7955 2:27967560-28011192
GeneTranscriptPositionBiotype
ENSDARG00000009903 (nadsyn1)
NAD synthetase 1 		ENSDART00000012484 (nadsyn1-201) 27990196-28011192 protein_coding
ENSDART00000149190 (nadsyn1-001) 27990088-27992381 protein_coding
ENSDARG00000015564 (dhcr7)
7-dehydrocholesterol reductase 		ENSDART00000008033 (dhcr7-201) 27968516-27989075 protein_coding
ENSDART00000112801 (dhcr7-202) 27967560-27977963 protein_coding
ENSDART00000149867 (dhcr7-001) 27968504-27989080 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001SL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172893-ENSG00000172890 CGP 9606 11:71428193-71524107
GeneTranscriptPositionBiotype
ENSG00000172890 (NADSYN1)
NAD synthetase 1 		ENST00000319023 (NADSYN1-001) 71453109-71501816 protein_coding
ENST00000524450 (NADSYN1-024) 71482723-71484392 retained_intron
ENST00000524949 (NADSYN1-011) 71453231-71464508 retained_intron
ENST00000525200 (NADSYN1-003) 71455125-71501541 nonsense_mediated_decay
ENST00000525245 (NADSYN1-022) 71453356-71460947 processed_transcript
ENST00000525593 (NADSYN1-019) 71497505-71505872 nonsense_mediated_decay
ENST00000526039 (NADSYN1-016) 71480149-71490876 processed_transcript
ENST00000527227 (NADSYN1-017) 71480152-71481430 retained_intron
ENST00000527538 (NADSYN1-013) 71453241-71460075 processed_transcript
ENST00000527852 (NADSYN1-023) 71477347-71482986 nonsense_mediated_decay
ENST00000527963 (NADSYN1-025) 71498402-71524107 nonsense_mediated_decay
ENST00000528211 (NADSYN1-021) 71503545-71504478 processed_transcript
ENST00000528509 (NADSYN1-002) 71453217-71477225 nonsense_mediated_decay
ENST00000529120 (NADSYN1-010) 71453211-71473294 nonsense_mediated_decay
ENST00000529840 (NADSYN1-015) 71478395-71485648 protein_coding
ENST00000530055 (NADSYN1-004) 71479294-71501539 protein_coding
ENST00000530534 (NADSYN1-014) 71473663-71479082 retained_intron
ENST00000530831 (NADSYN1-006) 71496435-71500035 retained_intron
ENST00000531236 (NADSYN1-005) 71480811-71498728 retained_intron
ENST00000533612 (NADSYN1-009) 71453209-71455460 retained_intron
ENST00000533769 (NADSYN1-012) 71453231-71472491 processed_transcript
ENST00000534634 (NADSYN1-008) 71453109-71459056 retained_intron
ENST00000624637 (NADSYN1-007) 71503864-71505874 TEC
ENSG00000172893 (DHCR7)
7-dehydrocholesterol reductase 		ENST00000355527 (DHCR7-001) 71434414-71448435 protein_coding
ENST00000407721 (DHCR7-003) 71434414-71448393 protein_coding
ENST00000525137 (DHCR7-013) 71435308-71439076 protein_coding
ENST00000525346 (DHCR7-010) 71443993-71448344 protein_coding
ENST00000526780 (DHCR7-011) 71441360-71448078 protein_coding
ENST00000527316 (DHCR7-006) 71437903-71448387 protein_coding
ENST00000527452 (DHCR7-005) 71444041-71452868 protein_coding
ENST00000529990 (DHCR7-008) 71444034-71448365 protein_coding
ENST00000531364 (DHCR7-009) 71443997-71448356 protein_coding
ENST00000533800 (DHCR7-014) 71434965-71438959 protein_coding
ENST00000534701 (DHCR7-012) 71438749-71441347 retained_intron
ENST00000534795 (DHCR7-004) 71428193-71439065 protein_coding
ENSG00000254682 (RP11-660L16.2)
 ENST00000529369 (RP11-660L16.2-001) 71448674-71452157 antisense
ENSG00000254924 (RP11-684B2.3)
 ENST00000532468 (RP11-684B2.3-001) 71506061-71506380 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SL_0001ENSDARG00000009903ENSDART00000012484ENSDART00000149190ENSDARG00000015564ENSDART00000008033ENSDART00000112801ENSDART00000149867CIL_0001SL_0002ENSG00000172890ENST00000319023ENST00000524450ENST00000524949ENST00000525200ENST00000525245ENST00000525593ENST00000526039ENST00000527227ENST00000527538ENST00000527852ENST00000527963ENST00000528211ENST00000528509ENST00000529120ENST00000529840ENST00000530055ENST00000530534ENST00000530831ENST00000531236ENST00000533612ENST00000533769ENST00000534634ENST00000624637ENSG00000172893ENST00000355527ENST00000407721ENST00000525137ENST00000525346ENST00000526780ENST00000527316ENST00000527452ENST00000529990ENST00000531364ENST00000533800ENST00000534701ENST00000534795ENSG00000254682ENST00000529369ENSG00000254924ENST00000532468
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SL_0001ENSDARG00000009903ENSDART00000012484ENSDART00000149190ENSDARG00000015564ENSDART00000008033ENSDART00000112801ENSDART00000149867CIL_0001SL_0002ENSG00000172890ENST00000319023ENST00000524450ENST00000525200ENST00000525593ENST00000527852ENST00000527963ENST00000528509ENST00000529840ENST00000530055ENST00000533769ENST00000624637ENSG00000172893ENST00000355527ENST00000407721ENST00000526780ENST00000527316ENST00000527452ENST00000531364ENST00000533800ENST00000534701ENSG00000254682ENST00000529369ENSG00000254924ENST00000532468
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009903 ENSDART00000012484 N/A N/A N/A 0.624±0.26 N/A N/A 1.604±0.96 2.432±0.00 0.193±0.00 N/A 0.867±0.00 N/A N/A N/A
ENSDART00000149190 N/A N/A N/A 0.413±0.00 N/A N/A N/A 3.295±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000015564 ENSDART00000008033 N/A N/A N/A 4.726±0.00 N/A N/A 3.852±2.28 N/A 0.243±0.00 N/A N/A N/A N/A N/A
ENSDART00000112801 N/A N/A N/A 1.205±0.58 N/A N/A 1.295±0.83 1.597±0.00 0.231±0.00 N/A N/A N/A N/A N/A
ENSDART00000149867 N/A N/A N/A 2.181±0.00 N/A N/A 0.896±0.00 1.629±0.00 0.119±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172890 ENST00000319023 9.779±0.00 11.154±0.00 N/A 3.084±1.67 3.873±2.44 3.007±0.00 1.490±1.25 8.837±0.00 6.175±0.00 4.534±3.03 1.114±0.91 6.799±4.08 11.422±3.85 8.274±0.00
ENST00000524450 N/A N/A N/A N/A N/A N/A 1.632±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000524949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525200 N/A N/A 0.849±0.00 N/A 1.249±0.00 1.342±0.00 N/A 1.517±1.17 N/A N/A 0.550±0.00 3.579±0.00 N/A N/A
ENST00000525245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.278±0.00 11.601±0.00 N/A
ENST00000526039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527852 N/A N/A N/A N/A N/A 9.719±0.00 N/A 4.203±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.099±0.00 N/A N/A N/A
ENST00000528211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528509 N/A N/A 0.653±0.00 N/A 1.831±0.00 4.006±0.00 0.175±0.00 N/A 1.605±0.00 1.363±0.00 N/A 0.883±0.00 N/A N/A
ENST00000529120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.217±0.67 N/A N/A N/A
ENST00000530055 N/A 5.654±0.00 0.697±0.00 N/A 3.262±1.13 2.872±1.49 1.137±0.00 2.428±1.26 1.777±0.45 3.509±0.28 0.517±0.00 4.555±2.39 N/A 10.782±0.00
ENST00000530534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533769 N/A N/A N/A N/A N/A N/A N/A 3.084±0.00 N/A N/A N/A 4.211±0.00 N/A N/A
ENST00000534634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624637 N/A N/A N/A 1.898±0.00 N/A 0.955±0.00 N/A N/A N/A N/A N/A 1.665±0.00 N/A N/A
ENSG00000172893 ENST00000355527 8.742±0.00 9.791±0.00 0.757±0.00 14.699±12.41 9.086±6.99 4.696±2.29 9.502±0.00 11.164±3.34 20.481±19.64 N/A 5.126±0.00 30.602±33.08 6.170±1.79 17.886±7.81
ENST00000407721 N/A N/A N/A 0.576±0.00 N/A N/A 0.740±0.00 N/A 41.440±0.00 4.449±3.96 0.941±0.00 2.686±0.00 N/A N/A
ENST00000525137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.758±0.00 N/A N/A
ENST00000527316 N/A N/A N/A 20.652±0.00 2.076±0.00 N/A N/A N/A N/A N/A 3.433±0.00 N/A N/A N/A
ENST00000527452 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00 N/A N/A N/A N/A
ENST00000529990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531364 11.894±0.00 N/A N/A 30.718±0.00 17.337±0.00 6.877±0.00 N/A N/A 0.684±0.00 N/A N/A N/A N/A 23.343±0.00
ENST00000533800 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.350±0.00 N/A 1.378±0.00 N/A N/A
ENST00000534701 N/A N/A N/A N/A N/A N/A 0.775±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000534795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254682 ENST00000529369 2.790±0.00 7.819±0.00 N/A 7.123±6.34 1.857±0.00 0.929±0.00 1.232±1.19 1.183±0.00 1.524±1.42 4.216±3.08 3.579±0.00 1.612±1.35 0.800±0.46 1.854±1.61
ENSG00000254924 ENST00000532468 N/A 0.213±0.00 N/A 0.383±0.00 0.487±0.00 N/A N/A N/A 0.048±0.00 N/A N/A N/A 0.219±0.00 0.084±0.00

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