C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgin B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173230 GOLGB1 9606 - 3:121663199-121749767 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340645 GOLGB1-001 121663199-121749755 protein_coding
  ENST00000393667 GOLGB1-002 121663203-121749740 protein_coding
  ENST00000472475 GOLGB1-007 121729990-121749163 protein_coding
  ENST00000472829 GOLGB1-006 121729128-121730216 processed_transcript
  ENST00000482512 GOLGB1-003 121664101-121749722 nonsense_mediated_decay
  ENST00000489400 GOLGB1-005 121697027-121729950 protein_coding
  ENST00000491690 GOLGB1-008 121664530-121677030 nonsense_mediated_decay
  ENST00000494517 GOLGB1-004 121695478-121749666 protein_coding
  ENST00000614479 GOLGB1-201 121663203-121749767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340645ENST00000393667ENST00000482512ENST00000491690ENST00000494517ENST00000614479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340645 N/A 1.874±0.00 N/A 0.851±0.00 N/A 2.723±0.00 1.515±0.42 3.355±0.00 1.273±0.92 1.143±0.00 0.270±0.00 2.560±0.00 1.729±0.00 3.672±0.00
ENST00000393667 3.935±0.00 1.351±0.00 3.241±0.00 1.806±0.56 2.382±0.08 2.109±0.00 1.065±0.00 2.551±0.75 1.244±0.60 4.285±0.00 N/A 2.255±0.64 0.484±0.10 3.436±0.00
ENST00000482512 N/A N/A 3.057±0.00 N/A 4.246±0.00 3.535±0.00 1.880±0.90 2.425±0.00 2.812±0.00 4.834±0.00 N/A 2.824±0.38 5.480±0.00 5.556±0.00
ENST00000491690 N/A N/A N/A N/A N/A N/A N/A N/A 5.455±0.00 N/A N/A N/A 4.635±0.00 N/A
ENST00000494517 N/A N/A N/A N/A 3.409±0.00 2.180±0.00 0.686±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614479 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.118±0.00 1.141±0.00 N/A 1.669±0.79 6.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057R CIL_00057R_0002 CGP 3:121631399-121749767

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA:IDA Golgi apparatus
GO:0005795 TAS Golgi stack
GO:0005801 IEA cis-Golgi network
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007030 TAS Golgi organization
GO:0007165 IEA signal transduction
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0043565 IEA sequence-specific DNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061951 golgb1 golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1 protein_coding Danio_rerio
ENSMUSG00000034243 Golgb1 golgi autoantigen, golgin subfamily b, macrogolgin 1 protein_coding Mus_musculus

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