C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgin B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393667 GOLGB1-002 ENSG00000173230 9606 - 3:121663203-121749740 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000393667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000393667 3.935±0.00 1.351±0.00 3.241±0.00 1.806±0.56 2.382±0.08 2.109±0.00 1.065±0.00 2.551±0.75 1.244±0.60 4.285±0.00 2.255±0.64 0.484±0.10 3.436±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057R CIL_00057R_0002 CGP 3:121631399-121749767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA:IDA Golgi apparatus
GO:0005795 TAS Golgi stack
GO:0005801 IEA cis-Golgi network
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007030 TAS Golgi organization
GO:0007165 IEA signal transduction
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0043565 IEA sequence-specific DNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039855 Golgb1-202 protein_coding Mus_musculus 0 5443
ENSMUST00000114812 Golgb1-001 protein_coding Mus_musculus 0 5443
ENSMUST00000152864 Golgb1-005 retained_intron Mus_musculus 0 571

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