C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00057R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012729-ENSDARG00000061951 CGP 7955 4:21236017-21274596
GeneTranscriptPositionBiotype
ENSDARG00000012729 (hcls1)
hematopoietic cell-specific Lyn substrate 1 		ENSDART00000052552 (hcls1-201) 21236017-21247351 protein_coding
ENSDART00000137814 (hcls1-001) 21236020-21247300 protein_coding
ENSDARG00000061951 (golgb1)
golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1 		ENSDART00000088963 (golgb1-201) 21248681-21272658 protein_coding
ENSDART00000131402 (golgb1-001) 21248546-21274596 protein_coding
CIL_00057R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180353-ENSG00000173230 CGP 9606 3:121631399-121749767
GeneTranscriptPositionBiotype
ENSG00000173230 (GOLGB1)
golgin B1 		ENST00000340645 (GOLGB1-001) 121663199-121749755 protein_coding
ENST00000393667 (GOLGB1-002) 121663203-121749740 protein_coding
ENST00000472475 (GOLGB1-007) 121729990-121749163 protein_coding
ENST00000472829 (GOLGB1-006) 121729128-121730216 processed_transcript
ENST00000482512 (GOLGB1-003) 121664101-121749722 nonsense_mediated_decay
ENST00000489400 (GOLGB1-005) 121697027-121729950 protein_coding
ENST00000491690 (GOLGB1-008) 121664530-121677030 nonsense_mediated_decay
ENST00000494517 (GOLGB1-004) 121695478-121749666 protein_coding
ENST00000614479 (GOLGB1-201) 121663203-121749767 protein_coding
ENSG00000180353 (HCLS1)
hematopoietic cell-specific Lyn substrate 1 		ENST00000314583 (HCLS1-001) 121631399-121660911 protein_coding
ENST00000428394 (HCLS1-004) 121631715-121660898 protein_coding
ENST00000464274 (HCLS1-014) 121637146-121660883 nonsense_mediated_decay
ENST00000468693 (HCLS1-013) 121656059-121660878 processed_transcript
ENST00000473883 (HCLS1-006) 121631400-121644183 processed_transcript
ENST00000479994 (HCLS1-008) 121657982-121660903 retained_intron
ENST00000481314 (HCLS1-011) 121644230-121660901 retained_intron
ENST00000487290 (HCLS1-003) 121644121-121660898 processed_transcript
ENST00000488033 (HCLS1-009) 121653565-121660916 processed_transcript
ENST00000491824 (HCLS1-007) 121656891-121660919 retained_intron
ENST00000495491 (HCLS1-002) 121632406-121660927 nonsense_mediated_decay
ENST00000497391 (HCLS1-010) 121644818-121660919 nonsense_mediated_decay
ENSG00000222057 (RNU4-62P)
RNA, U4 small nuclear 62, pseudogene 		ENST00000410125 (RNU4-62P-201) 121655475-121655604 snRNA
ENSG00000243544 (RN7SL172P)
RNA, 7SL, cytoplasmic 172, pseudogene 		ENST00000460535 (RN7SL172P-201) 121653994-121654296 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057R_0001ENSDARG00000012729ENSDART00000052552ENSDART00000137814ENSDARG00000061951ENSDART00000088963ENSDART00000131402CIL_00057R_0002ENSG00000173230ENST00000340645ENST00000393667ENST00000472475ENST00000472829ENST00000482512ENST00000489400ENST00000491690ENST00000494517ENST00000614479ENSG00000180353ENST00000314583ENST00000428394ENST00000464274ENST00000468693ENST00000473883ENST00000479994ENST00000481314ENST00000487290ENST00000488033ENST00000491824ENST00000495491ENST00000497391ENSG00000222057ENST00000410125ENSG00000243544ENST00000460535
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057R_0001ENSDARG00000012729ENSDART00000052552ENSDART00000137814ENSDARG00000061951ENSDART00000088963ENSDART00000131402CIL_00057R_0002ENSG00000173230ENST00000340645ENST00000393667ENST00000482512ENST00000491690ENST00000494517ENST00000614479ENSG00000180353ENST00000314583ENST00000428394ENST00000464274ENST00000473883ENST00000481314ENST00000495491ENST00000497391ENSG00000222057ENST00000410125ENSG00000243544ENST00000460535
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012729 ENSDART00000052552 N/A N/A N/A 2.059±1.29 N/A N/A 7.512±2.52 42.899±0.00 0.289±0.00 N/A 2.704±0.00 N/A N/A N/A
ENSDART00000137814 N/A N/A N/A 0.644±0.00 N/A N/A 15.792±0.00 26.356±3.91 N/A N/A N/A N/A N/A N/A
ENSDARG00000061951 ENSDART00000088963 N/A N/A N/A 3.870±0.25 N/A N/A 4.572±2.34 8.353±3.68 0.505±0.00 N/A 1.351±0.00 N/A N/A N/A
ENSDART00000131402 N/A N/A N/A 3.603±2.85 N/A N/A 2.270±0.00 1.904±0.00 0.178±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173230 ENST00000340645 N/A 1.874±0.00 N/A 0.851±0.00 N/A 2.723±0.00 1.515±0.42 3.355±0.00 1.273±0.92 1.143±0.00 0.270±0.00 2.560±0.00 1.729±0.00 3.672±0.00
ENST00000393667 3.935±0.00 1.351±0.00 3.241±0.00 1.806±0.56 2.382±0.08 2.109±0.00 1.065±0.00 2.551±0.75 1.244±0.60 4.285±0.00 N/A 2.255±0.64 0.484±0.10 3.436±0.00
ENST00000472475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482512 N/A N/A 3.057±0.00 N/A 4.246±0.00 3.535±0.00 1.880±0.90 2.425±0.00 2.812±0.00 4.834±0.00 N/A 2.824±0.38 5.480±0.00 5.556±0.00
ENST00000489400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491690 N/A N/A N/A N/A N/A N/A N/A N/A 5.455±0.00 N/A N/A N/A 4.635±0.00 N/A
ENST00000494517 N/A N/A N/A N/A 3.409±0.00 2.180±0.00 0.686±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614479 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.118±0.00 1.141±0.00 N/A 1.669±0.79 6.127±0.00
ENSG00000180353 ENST00000314583 47.917±0.00 76.723±0.00 0.608±0.00 5.527±4.67 10.405±6.83 4.784±3.53 10.772±0.00 12.715±8.28 9.527±6.77 14.204±9.56 1.601±0.00 23.077±19.75 61.039±7.98 2.590±1.39
ENST00000428394 N/A N/A 0.626±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464274 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.153±0.00 N/A N/A N/A N/A
ENST00000468693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473883 N/A N/A N/A 0.102±0.00 N/A 1.348±0.00 0.117±0.00 N/A N/A 2.216±0.11 0.331±0.00 N/A N/A 0.284±0.00
ENST00000479994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481314 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.082±0.00 N/A 2.173±0.00 N/A N/A
ENST00000487290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495491 N/A N/A N/A 7.716±0.00 N/A 2.055±0.00 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497391 N/A N/A N/A N/A N/A N/A 0.644±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000222057 ENST00000410125 3.216±0.00 7.231±0.00 N/A N/A 0.836±0.00 1.435±0.00 2.040±1.77 5.390±5.11 N/A N/A N/A 1.033±0.00 1.308±0.21 0.313±0.18
ENSG00000243544 ENST00000460535 0.167±0.00 2.890±0.00 N/A N/A 0.240±0.00 N/A 0.110±0.00 N/A N/A 0.109±0.00 N/A 0.247±0.08 0.479±0.00 N/A

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