C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173699 SPATA3 9606 + 2:230996121-231025055 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409956 SPATA3-005 230999569-231007271 processed_transcript
  ENST00000423134 SPATA3-007 230996389-231007284 protein_coding
  ENST00000424440 SPATA3-002 230996121-231007284 protein_coding
  ENST00000433428 SPATA3-003 230996138-231007284 protein_coding
  ENST00000440792 SPATA3-006 230996336-231007284 protein_coding
  ENST00000452881 SPATA3-001 230996126-231025055 protein_coding
  ENST00000454918 SPATA3-004 230996170-231002756 nonsense_mediated_decay
  ENST00000455816 SPATA3-008 230996234-231025019 protein_coding
  ENST00000495639 SPATA3-009 231002771-231025055 protein_coding
  ENST00000612823 SPATA3-201 230996154-231007263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalPlacentaTestisENST00000433428ENST00000440792ENST00000452881ENST00000455816
Transcript ID Adrenal Placenta Testis
ENST00000433428 N/A N/A 23.546±0.00
ENST00000440792 N/A N/A 16.324±5.83
ENST00000452881 N/A 0.026±0.00 N/A
ENST00000455816 0.120±0.00 N/A 8.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076O CIL_00076O_0001 CGP 2:230907318-231025055
CIL_00076P CIL_00076P_0001 CGP 2:230996121-231049719

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026226 Spata3 spermatogenesis associated 3 protein_coding Mus_musculus

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