C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026226 Spata3 10090 + 1:86016816-86029958 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052854 Spata3-001 86021942-86029958 protein_coding
  ENSMUST00000113344 Spata3-006 86021946-86027178 protein_coding
  ENSMUST00000125083 Spata3-004 86021943-86024666 protein_coding
  ENSMUST00000129169 Spata3-008 86016816-86024669 processed_transcript
  ENSMUST00000130504 Spata3-002 86021946-86029958 protein_coding
  ENSMUST00000131151 Spata3-010 86022105-86029264 protein_coding
  ENSMUST00000135440 Spata3-007 86021961-86024669 protein_coding
  ENSMUST00000149469 Spata3-009 86018693-86029248 processed_transcript
  ENSMUST00000152501 Spata3-003 86021946-86024668 protein_coding
  ENSMUST00000153247 Spata3-005 86021953-86029921 protein_coding
  ENSMUST00000159876 Spata3-011 86021960-86029262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000052854ENSMUST00000113344ENSMUST00000125083ENSMUST00000129169ENSMUST00000130504ENSMUST00000131151ENSMUST00000135440ENSMUST00000149469ENSMUST00000152501ENSMUST00000153247ENSMUST00000159876
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000052854 N/A N/A N/A N/A N/A N/A 0.196±0.00 0.042±0.03 N/A N/A N/A N/A
ENSMUST00000113344 N/A N/A N/A 0.042±0.00 N/A 0.090±0.03 N/A N/A 0.012±0.00 0.095±0.05 0.011±0.00 N/A
ENSMUST00000125083 0.083±0.00 N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A 0.062±0.00 N/A 58.072±0.00
ENSMUST00000129169 N/A N/A N/A 0.124±0.00 N/A N/A N/A 0.072±0.00 N/A 0.271±0.00 0.034±0.00 N/A
ENSMUST00000130504 0.032±0.00 N/A N/A 0.084±0.00 N/A N/A N/A 0.023±0.00 0.034±0.02 0.068±0.00 N/A 152.279±6.91
ENSMUST00000131151 N/A N/A N/A N/A N/A 0.063±0.00 0.046±0.01 0.029±0.00 0.060±0.00 N/A N/A 152.955±0.00
ENSMUST00000135440 0.074±0.00 N/A N/A N/A 0.049±0.00 0.114±0.07 0.074±0.00 0.050±0.04 N/A N/A N/A 24.267±0.00
ENSMUST00000149469 0.233±0.00 N/A 0.219±0.00 0.974±0.00 N/A N/A N/A 0.094±0.00 N/A 0.960±0.26 N/A N/A
ENSMUST00000152501 N/A N/A N/A N/A N/A 0.099±0.00 0.141±0.03 N/A N/A N/A N/A 193.913±31.66
ENSMUST00000153247 0.070±0.00 0.057±0.00 N/A 0.114±0.00 0.086±0.00 N/A 0.099±0.00 0.077±0.00 N/A 0.124±0.00 0.029±0.02 24.235±0.00
ENSMUST00000159876 N/A N/A N/A N/A N/A 0.152±0.06 0.166±0.00 N/A N/A N/A N/A 209.663±12.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076O CIL_00076O_0002 CGP 1:85938318-86029958
CIL_00076P CIL_00076P_0002 CGP 1:86016816-86055456

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000173699 SPATA3 spermatogenesis associated 3 protein_coding Homo_sapiens

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