C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD7 molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173762 CD7 9606 - 17:82314868-82317602 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312648 CD7-001 82314870-82317602 protein_coding
  ENST00000578509 CD7-006 82315975-82317558 protein_coding
  ENST00000581434 CD7-007 82316220-82317550 nonsense_mediated_decay
  ENST00000581744 CD7-004 82316132-82317553 retained_intron
  ENST00000582480 CD7-005 82316385-82317579 protein_coding
  ENST00000583376 CD7-003 82314874-82317552 protein_coding
  ENST00000584284 CD7-002 82314868-82317577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312648ENST00000578509ENST00000581434ENST00000581744ENST00000582480ENST00000583376ENST00000584284
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312648 1.389±0.00 13.333±0.00 N/A 0.659±0.00 1.226±0.00 0.169±0.00 0.408±0.00 0.633±0.56 10.057±9.36 0.148±0.00 5.544±4.13 9.037±2.41 0.618±0.00
ENST00000578509 N/A N/A N/A 0.367±0.00 N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A
ENST00000581434 1.733±0.00 18.589±0.00 0.123±0.00 1.826±0.00 1.181±0.00 N/A N/A N/A N/A N/A 1.666±0.00 N/A 1.991±0.00
ENST00000581744 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.258±0.00 N/A N/A N/A N/A
ENST00000582480 N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A 0.132±0.00 N/A 0.997±0.00
ENST00000583376 N/A N/A 0.101±0.00 N/A 0.263±0.00 N/A 0.581±0.00 N/A N/A N/A N/A N/A N/A
ENST00000584284 N/A 2.696±0.00 N/A 0.184±0.00 N/A N/A N/A 0.260±0.00 2.791±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075P CIL_00075P_0001 CGP 17:82239023-82317602
CIL_00054O CIL_00054O_0001 CGP 17:82314868-82334074

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006955 TAS immune response
GO:0007169 NAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 TAS membrane
GO:0016021 TAS integral component of membrane
GO:0042110 TAS T cell activation
GO:0048873 IEA homeostasis of number of cells within a tissue
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025163 Cd7 CD7 antigen protein_coding Mus_musculus

Loading