C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00054O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173762-ENSG00000141574 CGP 9606 17:82314868-82334074
GeneTranscriptPositionBiotype
ENSG00000141574 (SECTM1)
secreted and transmembrane 1 		ENST00000269389 (SECTM1-001) 82321024-82333998 protein_coding
ENST00000580437 (SECTM1-006) 82321887-82333762 protein_coding
ENST00000581691 (SECTM1-002) 82322879-82334074 protein_coding
ENST00000581864 (SECTM1-007) 82322115-82333748 nonsense_mediated_decay
ENST00000581954 (SECTM1-008) 82324853-82328506 protein_coding
ENST00000582290 (SECTM1-004) 82324729-82333766 protein_coding
ENST00000582563 (SECTM1-003) 82322965-82333769 protein_coding
ENST00000583093 (SECTM1-005) 82323280-82333763 protein_coding
ENSG00000173762 (CD7)
CD7 molecule 		ENST00000312648 (CD7-001) 82314870-82317602 protein_coding
ENST00000578509 (CD7-006) 82315975-82317558 protein_coding
ENST00000581434 (CD7-007) 82316220-82317550 nonsense_mediated_decay
ENST00000581744 (CD7-004) 82316132-82317553 retained_intron
ENST00000582480 (CD7-005) 82316385-82317579 protein_coding
ENST00000583376 (CD7-003) 82314874-82317552 protein_coding
ENST00000584284 (CD7-002) 82314868-82317577 protein_coding
CIL_00054O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025163-ENSMUSG00000039364 CGP 10090 11:121036747-121063569
GeneTranscriptPositionBiotype
ENSMUSG00000025163 (Cd7)
CD7 antigen 		ENSMUST00000026159 (Cd7-001) 121036747-121039418 protein_coding
ENSMUST00000163465 (Cd7-002) 121037885-121039418 retained_intron
ENSMUSG00000039364 (Sectm1b)
secreted and transmembrane 1B 		ENSMUST00000039309 (Sectm1b-001) 121053458-121063569 protein_coding
ENSMUST00000081499 (Sectm1b-002) 121054582-121063545 protein_coding
ENSMUST00000130786 (Sectm1b-003) 121054957-121063455 protein_coding
ENSMUST00000132117 (Sectm1b-005) 121055412-121063303 retained_intron
ENSMUST00000150577 (Sectm1b-004) 121056234-121056628 processed_transcript
ENSMUST00000168459 (Sectm1b-201) 121054531-121063538 protein_coding
ENSMUST00000170381 (Sectm1b-202) 121054536-121056363 protein_coding
ENSMUSG00000086835 (Gm11775)
predicted gene 11775 		ENSMUST00000136500 (Gm11775-001) 121029402-121052357 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054O_0001ENSG00000141574ENST00000269389ENST00000580437ENST00000581691ENST00000581864ENST00000581954ENST00000582290ENST00000582563ENST00000583093ENSG00000173762ENST00000312648ENST00000578509ENST00000581434ENST00000581744ENST00000582480ENST00000583376ENST00000584284CIL_00054O_0002ENSMUSG00000025163ENSMUST00000026159ENSMUST00000163465ENSMUSG00000039364ENSMUST00000039309ENSMUST00000081499ENSMUST00000130786ENSMUST00000132117ENSMUST00000150577ENSMUST00000168459ENSMUST00000170381ENSMUSG00000086835ENSMUST00000136500
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054O_0001ENSG00000141574ENST00000269389ENST00000580437ENST00000581691ENST00000581864ENST00000583093ENSG00000173762ENST00000312648ENST00000578509ENST00000581434ENST00000581744ENST00000582480ENST00000583376ENST00000584284CIL_00054O_0002ENSMUSG00000025163ENSMUST00000026159ENSMUST00000163465ENSMUSG00000039364ENSMUST00000039309ENSMUST00000130786ENSMUST00000132117ENSMUST00000168459ENSMUST00000170381ENSMUSG00000086835ENSMUST00000136500
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141574 ENST00000269389 3.310±0.00 2.216±0.00 N/A 0.651±0.00 2.423±0.59 N/A 0.081±0.00 0.497±0.00 0.738±0.32 2.501±0.00 0.714±0.00 2.909±2.25 5.495±2.81 0.383±0.19
ENST00000580437 4.784±0.00 6.046±0.00 N/A 0.387±0.10 4.858±0.00 4.543±0.00 0.815±0.00 1.341±0.00 0.411±0.00 N/A 0.787±0.00 3.982±0.88 2.770±1.31 2.483±0.00
ENST00000581691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.529±0.00
ENST00000581864 6.309±0.00 10.345±0.00 N/A 0.498±0.00 N/A 4.378±2.52 N/A N/A 0.557±0.05 N/A 1.196±0.00 5.931±4.34 2.726±0.00 0.978±0.67
ENST00000581954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583093 N/A N/A N/A N/A N/A N/A N/A N/A 0.992±0.00 N/A N/A N/A N/A N/A
ENSG00000173762 ENST00000312648 1.389±0.00 13.333±0.00 N/A N/A 0.659±0.00 1.226±0.00 0.169±0.00 0.408±0.00 0.633±0.56 10.057±9.36 0.148±0.00 5.544±4.13 9.037±2.41 0.618±0.00
ENST00000578509 N/A N/A N/A N/A 0.367±0.00 N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A
ENST00000581434 1.733±0.00 18.589±0.00 N/A 0.123±0.00 1.826±0.00 1.181±0.00 N/A N/A N/A N/A N/A 1.666±0.00 N/A 1.991±0.00
ENST00000581744 N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.258±0.00 N/A N/A N/A N/A
ENST00000582480 N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A 0.132±0.00 N/A 0.997±0.00
ENST00000583376 N/A N/A N/A 0.101±0.00 N/A 0.263±0.00 N/A 0.581±0.00 N/A N/A N/A N/A N/A N/A
ENST00000584284 N/A 2.696±0.00 N/A N/A 0.184±0.00 N/A N/A N/A 0.260±0.00 2.791±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025163 ENSMUST00000026159 1.334±0.79 0.605±0.31 0.469±0.14 0.067±0.07 12.051±4.64 3.183±1.45 0.455±0.29 0.779±0.47 0.650±0.42 2.944±0.61 0.267±0.23 2.579±1.34 0.145±0.07 0.688±0.00
ENSMUST00000163465 0.350±0.15 1.446±1.10 0.146±0.00 0.005±0.00 N/A N/A 0.511±0.00 0.404±0.00 0.737±0.47 N/A 0.168±0.00 1.380±0.61 0.124±0.00 N/A
ENSMUSG00000039364 ENSMUST00000039309 0.749±0.01 N/A N/A 0.004±0.00 0.173±0.05 65.624±9.30 N/A 16.948±1.15 0.044±0.03 0.120±0.07 0.037±0.00 1.108±0.52 0.140±0.05 0.078±0.07
ENSMUST00000081499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130786 N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A
ENSMUST00000132117 N/A N/A N/A 0.006±0.00 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00
ENSMUST00000150577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168459 N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.01 N/A N/A 1.968±1.07 0.205±0.00 0.115±0.00
ENSMUST00000170381 0.649±0.07 N/A N/A N/A 0.177±0.12 45.453±9.39 N/A 14.905±2.06 0.070±0.04 0.284±0.22 0.010±0.00 0.893±0.31 0.180±0.00 N/A
ENSMUSG00000086835 ENSMUST00000136500 N/A N/A N/A N/A N/A 1.554±0.00 N/A 0.148±0.05 N/A N/A N/A N/A N/A 2.083±0.94

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