C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuroepithelial cell transforming 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173848 NET1 9606 + 10:5412551-5458463 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355029 NET1-005 5412551-5458463 protein_coding
  ENST00000380359 NET1-006 5446611-5458463 protein_coding
  ENST00000449083 NET1-003 5446609-5454522 protein_coding
  ENST00000465087 NET1-002 5452419-5453153 processed_transcript
  ENST00000484741 NET1-004 5454381-5456530 processed_transcript
  ENST00000486354 NET1-001 5446609-5452897 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355029ENST00000380359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355029 2.466±0.00 2.760±0.00 N/A 2.870±1.42 N/A N/A 0.918±0.42 N/A 2.548±0.00 1.670±0.00 3.598±2.29 19.367±15.78 5.533±0.00 7.075±2.14
ENST00000380359 11.355±0.00 8.266±0.00 4.569±0.00 4.825±0.76 19.835±5.93 18.153±2.40 1.662±0.50 15.400±1.20 11.789±8.44 5.663±1.15 2.455±0.00 43.697±35.87 31.964±9.72 7.923±3.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097T CIL_00097T_0001 VISTA 10:5274654-5878045
CIL_0008HB CIL_0008HB_0001 VISTA 10:5286025-5887846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001558 NAS regulation of cell growth
GO:0005085 TAS guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0007165 TAS signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0017049 IEA GTP-Rho binding
GO:0032321 IMP positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0043065 IDA positive regulation of apoptotic process
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0051451 IEA myoblast migration
GO:0070301 IDA cellular response to hydrogen peroxide
GO:0071479 IDA cellular response to ionizing radiation
GO:0097190 TAS apoptotic signaling pathway
GO:1900026 IEA positive regulation of substrate adhesion-dependent cell spreading

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032765 net1 neuroepithelial cell transforming gene 1 protein_coding Danio_rerio
ENSMUSG00000021215 Net1 neuroepithelial cell transforming gene 1 protein_coding Mus_musculus

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