C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTF2I repeat domain containing 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174428 GTF2IRD2B 9606 + 7:75092573-75149817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000394939 GTF2IRD2B-007 75133155-75144068 retained_intron
  ENST00000418185 GTF2IRD2B-002 75092612-75149817 nonsense_mediated_decay
  ENST00000472837 GTF2IRD2B-001 75092581-75149817 protein_coding
  ENST00000611835 GTF2IRD2B-006 75125657-75149817 retained_intron
  ENST00000613786 GTF2IRD2B-009 75092573-75094141 processed_transcript
  ENST00000614064 GTF2IRD2B-005 75092600-75112699 protein_coding
  ENST00000617708 GTF2IRD2B-013 75120627-75123189 retained_intron
  ENST00000619142 GTF2IRD2B-004 75092592-75146950 protein_coding
  ENST00000620662 GTF2IRD2B-003 75092573-75123877 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000418185ENST00000611835ENST00000613786ENST00000614064ENST00000617708ENST00000619142ENST00000620662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000418185 N/A N/A N/A 0.129±0.04 0.471±0.00 N/A N/A N/A 0.114±0.04 N/A 0.361±0.00 0.449±0.05 0.196±0.07 N/A
ENST00000611835 0.164±0.00 0.428±0.00 0.317±0.00 N/A 0.184±0.00 0.178±0.05 0.206±0.05 0.384±0.16 0.188±0.00 0.432±0.00 0.112±0.00 0.522±0.54 0.195±0.16 0.347±0.09
ENST00000613786 0.523±0.00 N/A N/A N/A N/A N/A 1.037±0.00 2.587±0.00 N/A 0.836±0.00 N/A 3.301±0.00 0.616±0.20 2.416±0.63
ENST00000614064 N/A N/A N/A N/A N/A N/A 0.527±0.00 N/A 0.242±0.00 1.108±0.00 2.804±0.00 N/A N/A N/A
ENST00000617708 0.662±0.00 1.655±0.00 2.187±0.00 0.651±0.00 3.793±0.00 N/A 0.400±0.00 N/A 1.793±0.00 N/A N/A 1.955±0.00 N/A 1.853±0.00
ENST00000619142 0.168±0.00 1.369±0.00 0.239±0.00 0.365±0.22 0.565±0.28 0.356±0.09 0.199±0.07 0.712±0.00 0.239±0.13 0.534±0.05 0.305±0.00 0.491±0.23 0.107±0.04 0.376±0.19
ENST00000620662 N/A N/A N/A 0.186±0.00 N/A 0.158±0.00 N/A 0.143±0.00 0.117±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051K CIL_00051K_0001 CGP 7:75027122-75149817

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076812 CR538726.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000078791 CABZ01077217.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000015942 Gtf2ird2 GTF2I repeat domain containing 2 protein_coding Mus_musculus

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