C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTF2I repeat domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015942 Gtf2ird2 10090 + 5:134184019-134224355 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016086 Gtf2ird2-001 134184027-134218146 protein_coding
  ENSMUST00000123941 Gtf2ird2-002 134184019-134224355 nonsense_mediated_decay
  ENSMUST00000128842 Gtf2ird2-003 134206657-134216214 retained_intron
  ENSMUST00000135588 Gtf2ird2-004 134214109-134216612 protein_coding
  ENSMUST00000152587 Gtf2ird2-005 134214110-134216868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016086ENSMUST00000128842
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016086 3.273±1.80 2.745±0.74 3.801±1.05 6.522±1.72 4.053±0.22 2.370±0.76 1.404±0.36 1.648±0.41 1.343±0.79 3.894±0.21 1.425±0.36 4.374±1.54 1.197±0.65 2.430±1.17
ENSMUST00000128842 N/A N/A N/A 8.076±0.00 N/A N/A N/A N/A N/A N/A N/A 10.261±0.00 2.283±0.90 3.385±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051K CIL_00051K_0002 CGP 5:134148054-134224355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0014883 IDA transition between fast and slow fiber

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076812 CR538726.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000078791 CABZ01077217.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000174428 GTF2IRD2B GTF2I repeat domain containing 2B protein_coding Homo_sapiens
ENSG00000196275 GTF2IRD2 GTF2I repeat domain containing 2 protein_coding Homo_sapiens

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